Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 2.5e-84 315.8 219 100.0
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 2.4e-50 203.0 221 62.4
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 2.2e-43 179.9 216 57.9
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 1.0e-29 134.4 118 75.4
FAN02G2102 Fragaria x ananassa HOM05D007476 ORTHO05D006998 3.0e-29 132.9 186 59.1
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 4.5e-25 119.0 218 45.4
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.2e-24 116.7 218 48.6
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 4.2e-23 112.5 228 47.4
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 1.6e-22 110.5 236 41.9
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.0e-21 107.8 218 45.4
FAN14G0122 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.8e-21 107.1 204 51.0
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 8.8e-21 104.8 199 43.2
FvH4_6g14930 Fragaria vesca HOM05D007476 ORTHO05D006998 1.5e-20 104.0 155 60.0
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 2.6e-20 103.2 137 60.6
Potri.016G082900 Populus trichocarpa HOM05D007476 ORTHO05D006998 3.4e-20 102.8 203 47.8
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 3.7e-19 99.4 262 40.1
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 3.7e-19 99.4 141 54.6
FAN09G1326 Fragaria x ananassa HOM05D007476 ORTHO05D006998 6.3e-19 98.6 155 57.4
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 5.4e-18 95.5 200 45.0
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 2.0e-17 93.6 152 57.9
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.7e-17 93.2 184 44.6
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 4.5e-17 92.4 228 44.7
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 7.7e-17 91.7 138 60.1
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 1.3e-16 90.9 152 57.9
Haze_20680 Corylus avellana HOM05D007476 ORTHO05D006998 1.3e-16 90.9 293 33.1
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 1.3e-16 90.9 138 59.4
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 1.5e-15 87.4 138 60.9
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 3.2e-15 86.3 225 44.0
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 3.2e-15 86.3 212 44.3
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 9.5e-15 84.7 215 38.1
arahy.Tifrunner.gnm1.ann1.KRM1EW Arachis hypogaea HOM05D007476 ORTHO05D006998 1.2e-14 84.3 153 56.9
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.1e-14 83.6 215 37.7
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 8.0e-14 81.6 254 40.2
Potri.006G134000 Populus trichocarpa HOM05D007476 ORTHO05D006998 1.4e-13 80.9 153 55.6
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 1.8e-13 80.5 216 41.7
Lalb_Chr25g0289331 Lupinus albus HOM05D007476 ORTHO05D006998 3.0e-13 79.7 151 53.6
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 5.2e-13 79.0 222 41.4
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 8.8e-13 78.2 262 33.2
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 2.0e-12 77.0 217 46.5
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.3e-11 74.3 216 35.6
Lj1g0005274 Lotus japonicus HOM05D007476 ORTHO05D006998 1.8e-10 70.5 139 55.4
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 1.8e-10 70.5 201 42.8
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 2.4e-10 70.1 203 43.3
AUR62040509 Chenopodium quinoa HOM05D007476 ORTHO05D006998 3.1e-10 69.7 223 44.4
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 7.0e-10 68.6 143 43.4
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 9.2e-10 68.2 172 43.0
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 1.6e-09 67.4 143 44.8
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 4.5e-09 65.9 203 41.9
TPR.G21469 Trifolium pratense HOM05D007476 ORTHO05D006998 4.5e-09 65.9 147 49.7
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 7.8e-09 65.1 117 52.1
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 1.7e-08 63.9 155 50.3
GSVIVG01025570001 Vitis vinifera HOM05D007476 ORTHO05D006998 2.3e-08 63.5 120 50.8
PSO384G1224 Papaver somniferum HOM05D052811 ORTHO05D006998 2.9e-08 63.2 144 43.1
PSO699G0016 Papaver somniferum HOM05D052811 ORTHO05D006998 2.9e-08 63.2 144 43.1
BcaNung03275 Brassica carinata HOM05D010138 ORTHO05D006998 5.0e-08 62.4 113 50.4
C09p73910 Brassica napus HOM05D010138 ORTHO05D006998 5.0e-08 62.4 113 50.4
Ca_08810_v3 Cicer arietinum L. HOM05D007476 ORTHO05D006998 5.0e-08 62.4 222 41.4
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 1.5e-07 60.8 190 40.5
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 2.5e-07 60.1 145 42.1
EL10Ac7g17261 Beta vulgaris HOM05D007476 ORTHO05D006998 3.3e-07 59.7 149 39.6
PGR004G1949 Punica granatum HOM05D007476 ORTHO05D006998 3.3e-07 59.7 204 41.7
BcaB05g21871 Brassica carinata HOM05D010138 ORTHO05D006998 1.6e-06 57.4 152 42.1
BolC9t60125H Brassica oleracea HOM05D010138 ORTHO05D006998 3.6e-06 56.2 66 56.1
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 4.7e-06 55.8 136 43.4
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 4.7e-06 55.8 158 37.3
TWI74G1466 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 4.7e-06 55.8 149 45.6
Psat3g047760 Pisum sativum HOM05D007476 ORTHO05D006998 6.1e-06 55.5 217 40.1


User provided reference genes

Program Settings