Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1122100 Malus domestica HOM05D007569 ORTHO05D009268 6.7e-30 133.3 63 100.0
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 3.9e-22 107.5 61 82.0
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 2.2e-17 91.7 61 70.5
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 7.4e-13 76.6 64 56.2
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 1.3e-12 75.9 62 54.8
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 1.6e-12 75.5 65 60.0
FvH4_6g15530 Fragaria vesca HOM05D007569 ORTHO05D009268 8.2e-12 73.2 62 58.1
FAN02G0921 Fragaria x ananassa HOM05D000214 ORTHO05D009268 8.2e-12 73.2 66 62.1
FAN14G4266 Fragaria x ananassa HOM05D007569 ORTHO05D009268 8.2e-12 73.2 62 58.1
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 1.4e-11 72.4 63 55.6
FAN05G3967 Fragaria x ananassa HOM05D007569 ORTHO05D009268 3.1e-11 71.2 66 57.6
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 5.3e-11 70.5 63 54.0
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 6.9e-11 70.1 63 55.6
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 2.0e-10 68.6 67 55.2
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 5.9e-10 67.0 62 56.5
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 5.9e-10 67.0 61 54.1
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 1.0e-09 66.2 65 55.4
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 1.3e-09 65.9 66 53.0
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 2.9e-09 64.7 64 56.2
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 5.0e-09 63.9 60 48.3
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 6.5e-09 63.5 64 53.1
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 6.5e-09 63.5 63 49.2
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 8.5e-09 63.2 64 53.1
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 4.2e-08 60.8 61 49.2
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 1.2e-07 59.3 66 53.0
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 1.6e-07 58.9 63 47.6
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 3.0e-06 54.7 51 51.0
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 5.1e-06 53.9 63 47.6
Gohir.A13G025100 Gossypium hirsutum HOM05D007569 ORTHO05D009268 5.1e-06 53.9 62 46.8
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 8.8e-06 53.1 60 43.3
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 8.8e-06 53.1 63 44.4


User provided reference genes

Program Settings