Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 9.5e-150 533.5 271 100.0
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 4.5e-91 338.6 274 71.2
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 7.4e-86 321.2 274 68.6
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 1.0e-79 300.8 278 62.9
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.8e-79 300.1 275 61.5
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 1.7e-77 293.5 273 61.2
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 8.2e-77 291.2 276 60.9
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 1.8e-76 290.0 273 61.9
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 3.1e-76 289.3 275 61.5
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 2.6e-75 286.2 256 62.5
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 5.9e-75 285.0 275 60.4
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 5.9e-75 285.0 275 61.5
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 5.9e-75 285.0 210 71.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 7.7e-75 284.6 228 66.2
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 1.0e-74 284.3 209 70.8
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 2.2e-74 283.1 252 63.5
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 2.9e-74 282.7 237 65.0
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 5.0e-74 282.0 275 59.6
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 5.0e-74 282.0 278 60.4
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.1e-73 280.8 275 58.9
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.1e-73 280.8 275 58.9
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.1e-73 280.8 256 62.1
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.1e-73 280.8 291 61.2
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 1.9e-73 280.0 256 61.3
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 2.5e-73 279.6 273 59.7
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 5.5e-73 278.5 158 84.2
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 7.2e-73 278.1 181 77.9
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 9.4e-73 277.7 273 58.2
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 9.4e-73 277.7 274 58.8
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 9.4e-73 277.7 200 69.0
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 2.1e-72 276.6 274 61.3
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 2.1e-72 276.6 276 60.1
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 2.1e-72 276.6 237 64.1
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 2.7e-72 276.2 275 57.8
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 2.7e-72 276.2 281 58.7
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 3.6e-72 275.8 272 58.8
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 3.6e-72 275.8 183 77.6
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 3.6e-72 275.8 158 84.8
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 4.7e-72 275.4 273 60.4
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 6.1e-72 275.0 276 59.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 8.0e-72 274.6 272 58.8
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 8.0e-72 274.6 249 61.8
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 1.8e-71 273.5 210 70.5
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 3.0e-71 272.7 273 59.0
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 5.2e-71 271.9 275 58.2
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 5.2e-71 271.9 274 58.4
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 6.7e-71 271.6 154 84.4
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 6.7e-71 271.6 158 82.3
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 8.8e-71 271.2 275 57.8
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 8.8e-71 271.2 275 57.8
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 1.5e-70 270.4 275 57.8
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.0e-70 270.0 179 76.0
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 3.3e-70 269.2 274 56.9
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 4.4e-70 268.9 273 58.2
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 4.4e-70 268.9 300 55.3
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 5.7e-70 268.5 241 61.4
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 5.7e-70 268.5 155 80.6
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 7.5e-70 268.1 272 57.4
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 7.5e-70 268.1 153 84.3
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 2.2e-69 266.5 155 81.9
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 3.7e-69 265.8 153 83.0
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 4.8e-69 265.4 158 80.4
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 8.2e-69 264.6 276 56.2
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 1.1e-68 264.2 272 57.7
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.1e-68 264.2 270 57.0
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 2.4e-68 263.1 279 57.3
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.4e-68 263.1 240 61.7
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 2.7e-67 259.6 238 58.4
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 2.9e-66 256.1 290 54.1
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 1.2e-62 244.2 277 54.9
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 2.6e-62 243.0 211 63.0
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 4.4e-62 242.3 193 67.4
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 5.7e-62 241.9 273 55.3
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 5.7e-62 241.9 156 75.6
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 1.3e-61 240.7 256 57.4
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 1.8e-60 236.9 134 83.6
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 5.4e-60 235.3 153 72.5
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.2e-59 234.2 272 53.3
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 4.5e-59 232.3 158 72.2
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 5.9e-59 231.9 254 55.5
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 2.9e-58 229.6 155 70.3
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 5.0e-58 228.8 239 59.0
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.0e-55 221.1 123 87.0
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.8e-55 220.3 181 59.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 1.2e-54 217.6 276 49.3
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 4.4e-54 215.7 265 50.2
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.3e-53 214.2 253 53.4
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 2.2e-53 213.4 229 54.1
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 2.8e-53 213.0 216 57.4
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 2.4e-44 183.3 175 58.3
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 4.1e-44 182.6 98 88.8
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 4.6e-43 179.1 158 57.6
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 2.3e-39 166.8 99 83.8
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 5.2e-39 165.6 129 71.3
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 2.0e-38 163.7 172 57.6
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 7.0e-36 155.2 182 52.7
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.3e-33 146.0 124 62.1
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 2.4e-28 130.2 75 82.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.8e-23 114.0 65 80.0
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 2.4e-20 103.6 108 63.9
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 7.8e-19 98.6 56 89.3


User provided reference genes

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