Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 1.2e-67 259.6 127 100.0
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 1.2e-62 243.0 128 93.0
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 1.1e-60 236.5 128 89.8
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 1.4e-55 219.5 128 82.0
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 1.4e-55 219.5 128 80.5
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.9e-55 219.2 127 79.5
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 5.4e-55 217.6 127 78.7
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 7.1e-55 217.2 127 78.0
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.2e-55 216.9 127 77.2
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 9.2e-55 216.9 127 78.0
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 2.3e-53 212.2 127 78.7
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 5.1e-53 211.1 127 80.3
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 1.1e-52 209.9 129 76.7
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 1.5e-52 209.5 127 75.6
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 1.5e-52 209.5 127 78.7
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 4.3e-52 208.0 127 79.5
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 4.3e-52 208.0 127 79.5
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 5.6e-52 207.6 127 76.4
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 2.4e-50 202.2 144 67.4
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 3.1e-50 201.8 128 75.8
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.1e-50 201.8 124 77.4
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 4.0e-50 201.4 129 76.7
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 6.9e-50 200.7 133 73.7
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 9.0e-50 200.3 130 73.1
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 1.5e-49 199.5 127 75.6
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 1.5e-49 199.5 128 74.2
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 2.0e-49 199.1 129 72.9
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 2.6e-49 198.7 128 76.6
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 4.4e-49 198.0 129 72.9
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 5.8e-49 197.6 129 72.9
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 9.9e-49 196.8 124 75.8
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.3e-48 196.4 124 75.8
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 1.7e-48 196.1 127 73.2
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 2.2e-48 195.7 129 72.1
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 2.9e-48 195.3 127 74.0
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 8.4e-48 193.7 127 74.0
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 8.4e-48 193.7 123 73.2
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 2.4e-47 192.2 129 70.5
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 2.4e-47 192.2 131 71.8
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 3.2e-47 191.8 127 68.5
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 3.2e-47 191.8 127 68.5
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 3.2e-47 191.8 127 68.5
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 3.2e-47 191.8 127 71.7
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 4.2e-47 191.4 127 67.7
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 4.2e-47 191.4 128 72.7
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 5.4e-47 191.0 127 69.3
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 5.4e-47 191.0 127 68.5
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 5.4e-47 191.0 127 68.5
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 9.3e-47 190.3 127 68.5
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 9.3e-47 190.3 128 68.0
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 9.3e-47 190.3 127 67.7
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 9.3e-47 190.3 126 71.4
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 1.2e-46 189.9 127 68.5
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 1.2e-46 189.9 127 73.2
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 1.2e-46 189.9 127 67.7
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 3.5e-46 188.3 129 71.3
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 3.5e-46 188.3 126 69.0
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 3.5e-46 188.3 171 60.2
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 6.0e-46 187.6 126 72.2
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 7.8e-46 187.2 126 65.9
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 1.0e-45 186.8 122 69.7
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 1.7e-45 186.0 128 75.0
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 2.3e-45 185.7 129 68.2
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 3.0e-45 185.3 128 70.3
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 3.9e-45 184.9 127 67.7
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 3.9e-45 184.9 128 68.0
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 5.1e-45 184.5 136 71.3
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 6.6e-45 184.1 136 67.6
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 8.7e-45 183.7 129 68.2
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 1.5e-44 183.0 127 66.9
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 3.3e-44 181.8 120 70.0
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.3e-44 181.8 125 71.2
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.1e-43 179.1 127 69.3
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 2.1e-43 179.1 105 80.0
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 2.1e-43 179.1 116 71.6
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.8e-43 178.7 127 69.3
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 6.2e-43 177.6 127 68.5
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 6.2e-43 177.6 124 68.5
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 6.2e-43 177.6 120 67.5
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 1.8e-42 176.0 144 65.3
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 1.8e-42 176.0 129 63.6
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 5.3e-42 174.5 128 63.3
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.2e-41 173.3 118 67.8
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.8e-41 171.0 107 74.8
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 2.9e-40 168.7 118 66.1
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 8.4e-40 167.2 111 73.0
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 3.5e-38 161.8 114 64.9
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.1e-36 156.8 111 66.7
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.9e-36 156.0 118 57.6
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 5.6e-36 154.5 109 67.9
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 3.1e-34 148.7 111 64.9
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 2.0e-33 146.0 127 61.4
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 2.2e-32 142.5 122 51.6
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 1.4e-31 139.8 89 73.0
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 1.4e-31 139.8 104 58.7
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 2.4e-31 139.0 122 50.0
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.6e-30 136.3 102 56.9
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 3.5e-30 135.2 99 61.6
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 6.7e-29 131.0 94 68.1
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 1.1e-28 130.2 93 68.8
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 1.3e-27 126.7 105 55.2
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 2.8e-27 125.6 132 47.0
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 3.7e-27 125.2 126 46.0
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 3.7e-27 125.2 126 46.8
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 8.2e-27 124.0 131 50.4
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.1e-26 123.6 96 62.5
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 4.0e-26 121.7 79 69.6
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 3.4e-25 118.6 86 64.0
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 3.4e-25 118.6 128 47.7
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 8.4e-24 114.0 105 51.4
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 2.7e-22 109.0 131 50.4
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.9e-21 105.1 65 70.8
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 3.3e-20 102.1 129 46.5
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.7e-14 82.4 63 52.4
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.0e-13 80.5 62 62.9
MD15G1372000 Malus domestica HOM05D006897 ORTHO05D248129 7.4e-12 74.3 45 73.3
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 1.8e-10 69.7 43 67.4
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 5.3e-10 68.2 58 60.3
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 2.6e-09 65.9 51 64.7
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 2.6e-09 65.9 39 69.2


User provided reference genes

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