Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 1.4e-128 463.0 235 100.0
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 4.0e-88 328.6 238 74.8
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 6.4e-86 321.2 235 72.8
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 1.4e-85 320.1 233 73.4
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 4.6e-84 315.1 235 71.1
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.5e-82 310.1 235 70.2
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 9.0e-80 300.8 235 68.9
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.0e-79 299.7 235 68.1
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 6.7e-75 284.6 244 64.3
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 6.7e-75 284.6 242 64.5
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 6.7e-75 284.6 188 75.0
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 1.5e-74 283.5 181 77.3
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 1.5e-74 283.5 192 74.0
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.9e-74 283.1 233 63.9
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 4.3e-74 282.0 232 66.4
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 7.4e-74 281.2 194 73.2
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 9.6e-74 280.8 233 62.7
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 1.6e-73 280.0 177 76.3
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 2.8e-73 279.3 193 72.0
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 3.7e-73 278.9 242 64.5
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 6.3e-73 278.1 237 63.7
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 1.1e-72 277.3 234 64.5
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 1.4e-72 276.9 188 75.0
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.8e-72 276.6 195 70.8
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 3.1e-72 275.8 244 63.9
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 4.1e-72 275.4 185 75.7
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 4.1e-72 275.4 185 75.7
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 5.3e-72 275.0 181 74.0
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 6.9e-72 274.6 191 73.3
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 1.2e-71 273.9 225 64.0
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 1.5e-71 273.5 233 61.8
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.5e-71 273.5 232 62.5
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.5e-71 273.5 219 64.4
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 2.6e-71 272.7 179 70.9
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 4.5e-71 271.9 237 63.7
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 4.5e-71 271.9 189 72.0
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 4.5e-71 271.9 175 74.3
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 4.5e-71 271.9 234 63.2
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 4.5e-71 271.9 234 63.7
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 5.9e-71 271.6 242 61.2
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 3.8e-70 268.9 234 59.0
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 3.8e-70 268.9 241 61.0
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 5.0e-70 268.5 181 72.9
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 6.5e-70 268.1 169 76.3
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 6.5e-70 268.1 181 72.4
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.1e-69 267.3 243 60.9
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 3.2e-69 265.8 191 69.1
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 7.2e-69 264.6 174 72.4
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 9.3e-69 264.2 202 66.3
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 9.3e-69 264.2 195 67.2
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 9.3e-69 264.2 182 69.8
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 1.6e-68 263.5 230 61.7
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 2.1e-68 263.1 193 65.8
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 2.7e-68 262.7 220 62.3
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 3.5e-68 262.3 186 67.7
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 3.5e-68 262.3 211 65.9
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 3.5e-68 262.3 191 68.1
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 4.6e-68 261.9 180 69.4
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 1.3e-67 260.4 183 68.9
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.3e-67 260.4 241 60.2
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 5.1e-67 258.5 231 61.0
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 1.1e-66 257.3 188 68.1
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.5e-66 256.9 230 60.0
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.9e-66 256.5 169 72.8
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 4.3e-66 255.4 187 66.8
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.3e-65 253.8 171 69.6
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.2e-65 253.1 176 69.9
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 2.2e-65 253.1 194 66.0
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 2.8e-65 252.7 222 65.3
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 2.8e-65 252.7 234 59.0
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 5.3e-64 248.4 247 56.3
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 5.3e-64 248.4 174 69.0
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 6.9e-64 248.1 273 52.4
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 5.9e-63 245.0 233 59.2
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 7.7e-63 244.6 195 63.1
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.0e-62 244.2 189 65.1
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 6.5e-62 241.5 218 59.6
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.1e-61 240.7 235 57.0
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 9.4e-61 237.7 168 67.9
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 6.1e-60 235.0 211 63.0
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 1.0e-59 234.2 148 77.0
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 3.0e-59 232.6 220 61.4
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 5.1e-59 231.9 267 51.7
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 2.4e-56 223.0 147 70.1
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 6.9e-56 221.5 304 45.7
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 7.7e-55 218.0 143 72.0
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 8.5e-54 214.5 152 69.1
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 2.5e-53 213.0 203 59.6
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 1.2e-52 210.7 203 59.6
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 2.1e-44 183.3 131 66.4
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 4.0e-43 179.1 127 67.7
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 4.0e-43 179.1 127 66.9
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 8.8e-43 177.9 127 67.7
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.8e-41 172.9 231 45.9
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 1.8e-40 170.2 198 42.9
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 1.1e-37 161.0 228 41.7
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.8e-32 143.7 164 55.5
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 4.7e-28 129.0 80 75.0
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 8.9e-19 98.2 221 27.6
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 9.5e-13 78.2 114 50.0
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.2e-07 61.2 75 53.3
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.2e-07 61.2 93 45.2
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 2.3e-06 57.0 76 50.0


User provided reference genes

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