Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.2e-74 283.1 142 100.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 5.7e-53 211.1 142 74.6
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 2.7e-39 165.6 138 67.4
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.0e-38 163.7 142 63.4
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.1e-37 160.2 137 63.5
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.1e-37 160.2 137 63.5
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.8e-35 152.9 142 58.5
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.1e-35 151.8 137 61.3
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 5.3e-35 151.4 140 56.4
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.6e-34 149.8 132 61.4
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.5e-34 148.7 130 62.3
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.3e-33 146.7 103 71.8
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.8e-33 145.2 103 70.9
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 5.0e-33 144.8 142 55.6
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 6.5e-33 144.4 132 61.4
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.5e-32 143.3 143 57.3
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.9e-32 142.9 131 57.3
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 2.5e-32 142.5 143 55.9
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 5.5e-32 141.4 141 54.6
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 5.5e-32 141.4 141 54.6
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 5.5e-32 141.4 141 54.6
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 7.2e-32 141.0 142 55.6
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 9.4e-32 140.6 136 56.6
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.0e-30 137.1 143 55.2
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.4e-30 136.7 136 56.6
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 5.2e-30 134.8 139 51.8
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 6.7e-30 134.4 133 56.4
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.2e-29 133.7 136 51.5
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.0e-29 132.9 131 55.0
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 2.6e-29 132.5 121 60.3
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 3.3e-29 132.1 143 52.4
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 7.5e-29 131.0 145 54.5
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.3e-28 130.2 137 55.5
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.7e-28 128.6 137 54.0
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 6.3e-28 127.9 142 49.3
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 6.3e-28 127.9 137 53.3
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 8.2e-28 127.5 143 50.3
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.1e-27 127.1 149 51.0
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 1.8e-27 126.3 136 52.2
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 1.8e-27 126.3 129 53.5
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 2.4e-27 125.9 141 49.6
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 3.1e-27 125.6 142 51.4
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 4.1e-27 125.2 97 63.9
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 4.1e-27 125.2 103 64.1
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 9.1e-27 124.0 104 63.5
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 4.5e-26 121.7 71 80.3
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 7.7e-26 120.9 131 48.1
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 1.0e-25 120.6 103 62.1
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.0e-25 120.6 132 54.5
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 1.3e-25 120.2 135 50.4
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 5.0e-25 118.2 141 48.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 8.5e-25 117.5 136 51.5
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.5e-24 116.7 88 65.9
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 1.5e-24 116.7 142 47.9
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 3.2e-24 115.5 141 45.4
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 3.2e-24 115.5 84 65.5
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 4.2e-24 115.2 75 73.3
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 5.5e-24 114.8 148 47.3
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.1e-23 112.8 76 75.0
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 3.6e-23 112.1 70 74.3
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.6e-23 112.1 138 50.7
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.0e-22 110.5 78 70.5
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 1.4e-22 110.2 83 67.5
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.8e-22 109.8 69 76.8
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 2.3e-22 109.4 81 66.7
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 2.3e-22 109.4 87 62.1
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 3.0e-22 109.0 144 47.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 6.8e-22 107.8 127 48.8
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 2.6e-21 105.9 67 77.6
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 3.4e-21 105.5 68 77.9
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 5.7e-21 104.8 74 68.9
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 1.7e-20 103.2 103 52.4
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 2.2e-20 102.8 62 77.4
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.8e-20 102.4 62 77.4
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 3.7e-20 102.1 67 71.6
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 4.8e-20 101.7 93 57.0
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 6.3e-20 101.3 127 47.2
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 6.3e-20 101.3 130 46.2
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 8.3e-20 100.9 131 46.6
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 1.1e-19 100.5 64 73.4
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.1e-19 100.5 74 63.5
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.8e-19 99.8 72 70.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 3.1e-19 99.0 62 74.2
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 3.1e-19 99.0 62 74.2
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 4.1e-19 98.6 62 74.2
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 4.1e-19 98.6 62 74.2
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 5.4e-19 98.2 67 70.1
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 5.4e-19 98.2 72 65.3
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 7.0e-19 97.8 133 42.9
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 1.6e-18 96.7 82 57.3
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.6e-18 96.7 82 57.3
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.6e-18 96.7 82 57.3
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 2.0e-18 96.3 62 74.2
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 2.7e-18 95.9 117 47.0
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 2.7e-18 95.9 62 71.0
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 5.9e-18 94.7 82 54.9
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 7.7e-18 94.4 70 65.7
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 7.7e-18 94.4 70 65.7
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.3e-17 92.8 68 70.6
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 3.8e-17 92.0 128 43.0
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 1.1e-16 90.5 91 54.9
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 9.5e-16 87.4 125 40.8
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 2.8e-15 85.9 71 59.2
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.2e-13 80.5 72 59.7
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.5e-13 77.8 53 73.6
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 2.2e-12 76.3 72 48.6
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 3.1e-11 72.4 53 60.4
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.5e-10 68.9 96 43.8
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 3.5e-10 68.9 90 44.4


User provided reference genes

Program Settings