Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1036000 Malus domestica HOM05D003756 ORTHO05D004304 1.0e-34 149.4 73 100.0
MD14G1022700 Malus domestica HOM05D003756 ORTHO05D004304 3.0e-34 147.9 73 98.6
ClCG04G010070 Citrullus lanatus HOM05D003756 ORTHO05D004304 1.5e-33 145.6 73 95.9
Prupe.7G110400 Prunus persica HOM05D003756 ORTHO05D004304 1.7e-32 142.1 73 94.5
Gohir.A01G206400 Gossypium hirsutum HOM05D003756 ORTHO05D004304 4.8e-32 140.6 73 94.5
Gorai.002G240000 Gossypium raimondii HOM05D003756 ORTHO05D004304 4.8e-32 140.6 73 94.5
Prupe.1G506800 Prunus persica HOM05D003756 ORTHO05D004304 6.3e-32 140.2 73 93.2
ClCG04G010050 Citrullus lanatus HOM05D003756 ORTHO05D004304 8.3e-32 139.8 73 93.2
MD07G1149900 Malus domestica HOM05D003756 ORTHO05D004304 8.3e-32 139.8 73 93.2
Eucgr.K02043 Eucalyptus grandis HOM05D003756 ORTHO05D004304 1.4e-31 139.0 73 90.4
Gohir.D01G195800 Gossypium hirsutum HOM05D003756 ORTHO05D004304 1.4e-31 139.0 73 93.2
CANSAT80G0977 Cannabis sativa HOM05D003756 ORTHO05D004304 2.4e-31 138.3 73 90.4
RcHm_v2.0_Chr3g0473621 Rosa chinensis HOM05D003756 ORTHO05D004304 7.0e-31 136.7 73 90.4
arahy.Tifrunner.gnm1.ann1.IH6TUL Arachis hypogaea HOM05D003756 ORTHO05D004304 9.1e-31 136.3 73 87.7
Sed0019143 Sechium edule HOM05D003756 ORTHO05D004304 9.1e-31 136.3 71 91.5
ClCG10G018980 Citrullus lanatus HOM05D003756 ORTHO05D004304 1.6e-30 135.6 73 89.0
FvH4_5g38790 Fragaria vesca HOM05D003756 ORTHO05D004304 1.6e-30 135.6 73 90.4
Sed0014276 Sechium edule HOM05D003756 ORTHO05D004304 1.6e-30 135.6 73 89.0
Ah.15g090880 Amaranthus hybridus HOM05D003756 ORTHO05D004304 2.0e-30 135.2 73 86.3
Duzib128G1348 Durio zibethinus HOM05D003756 ORTHO05D004304 2.0e-30 135.2 74 91.9
TAR636G3345 Trochodendron aralioides HOM05D003756 ORTHO05D004304 2.0e-30 135.2 71 88.7
Cpa.g.sc5.21 Carica papaya HOM05D003756 ORTHO05D004304 2.7e-30 134.8 73 87.7
Gohir.A09G139300 Gossypium hirsutum HOM05D003756 ORTHO05D004304 2.7e-30 134.8 74 91.9
Gohir.D09G135300 Gossypium hirsutum HOM05D003756 ORTHO05D004304 2.7e-30 134.8 74 91.9
Gorai.006G155200 Gossypium raimondii HOM05D003756 ORTHO05D004304 2.7e-30 134.8 74 91.9
Lj6g0015332 Lotus japonicus HOM05D003756 ORTHO05D004304 2.7e-30 134.8 73 89.0
MELO3C024548.2 Cucumis melo HOM05D003756 ORTHO05D004304 3.5e-30 134.4 73 89.0
Nn6g34903 Nelumbo nucifera HOM05D003756 ORTHO05D004304 3.5e-30 134.4 73 90.4
AUR62006180 Chenopodium quinoa HOM05D003756 ORTHO05D004304 4.5e-30 134.0 71 88.7
AUR62028527 Chenopodium quinoa HOM05D003756 ORTHO05D004304 4.5e-30 134.0 71 88.7
Duzib106G1642 Durio zibethinus HOM05D003756 ORTHO05D004304 4.5e-30 134.0 74 90.5
Thecc.05G088800 Theobroma cacao HOM05D003756 ORTHO05D004304 4.5e-30 134.0 74 91.9
FAN02G3109 Fragaria x ananassa HOM05D003756 ORTHO05D004304 5.9e-30 133.7 71 91.5
FAN05G1127 Fragaria x ananassa HOM05D003756 ORTHO05D004304 7.7e-30 133.3 74 90.5
FAN05G3155 Fragaria x ananassa HOM05D003756 ORTHO05D004304 7.7e-30 133.3 74 90.5
FAN09G2235 Fragaria x ananassa HOM05D003756 ORTHO05D004304 7.7e-30 133.3 74 90.5
Gohir.D01G127900 Gossypium hirsutum HOM05D003756 ORTHO05D004304 1.3e-29 132.5 74 89.2
Gorai.002G158500 Gossypium raimondii HOM05D003756 ORTHO05D004304 1.3e-29 132.5 74 89.2
MD15G1359000 Malus domestica HOM05D003756 ORTHO05D004304 1.3e-29 132.5 73 89.0
FvH4_6g18660 Fragaria vesca HOM05D003756 ORTHO05D004304 1.7e-29 132.1 74 89.2
FAN14G1823 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.7e-29 132.1 74 89.2
MBI17_g08353_MAGBIO Magnolia biondii HOM05D003756 ORTHO05D004304 2.2e-29 131.7 71 90.1
CDE06G0646 Ceratophyllum demersum HOM05D003756 ORTHO05D004304 2.9e-29 131.3 73 86.3
Psat3g033400 Pisum sativum HOM05D003756 ORTHO05D004304 2.9e-29 131.3 73 86.3
CiPaw.09G013700 Carya illinoinensis HOM05D003756 ORTHO05D004304 3.8e-29 131.0 73 86.3
CiPaw.10G009500 Carya illinoinensis HOM05D003756 ORTHO05D004304 5.0e-29 130.6 73 84.9
MELO3C009472.2 Cucumis melo HOM05D003756 ORTHO05D004304 5.0e-29 130.6 73 86.3
CsaV3_3G037270 Cucumis sativus L. HOM05D003756 ORTHO05D004304 5.0e-29 130.6 73 86.3
FAN18G4123 Fragaria x ananassa HOM05D003756 ORTHO05D004304 6.5e-29 130.2 76 86.8
TWI74G1420 Tripterygium wilfordii HOM05D003756 ORTHO05D004304 6.5e-29 130.2 71 84.5
Cfa016605 Carpinus fangiana HOM05D003756 ORTHO05D004304 8.5e-29 129.8 74 86.5
Haze_19608 Corylus avellana HOM05D003756 ORTHO05D004304 8.5e-29 129.8 74 86.5
Gohir.A01G138200 Gossypium hirsutum HOM05D003756 ORTHO05D004304 8.5e-29 129.8 74 86.5
Aqoxy2G03946 Aquilegia oxysepala HOM05D003756 ORTHO05D004304 1.1e-28 129.4 69 88.4
CSS0028702 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.5e-28 129.0 71 83.1
Ca_09004_v3 Cicer arietinum L. HOM05D003756 ORTHO05D004304 1.9e-28 128.6 73 83.6
Glyma.13G153500 Glycine max HOM05D003756 ORTHO05D004304 1.9e-28 128.6 74 83.8
Medtr7g104570 Medicago truncatula HOM05D003756 ORTHO05D004304 2.5e-28 128.3 73 83.6
Potri.009G149300 Populus trichocarpa HOM05D003756 ORTHO05D004304 2.5e-28 128.3 73 80.8
Atru.chr8.1542 Acer truncatum HOM05D003756 ORTHO05D004304 4.2e-28 127.5 73 84.9
FAN04G2492 Fragaria x ananassa HOM05D003756 ORTHO05D004304 5.5e-28 127.1 67 89.6
Sc20g0006280 Simmondsia chinensis HOM05D003756 ORTHO05D004304 5.5e-28 127.1 73 82.2
Actinidia24215 Actinidia chinensis HOM05D003756 ORTHO05D004304 7.2e-28 126.7 71 87.3
HanXRQChr01g0024081 Helianthus annuus HOM05D003756 ORTHO05D004304 7.2e-28 126.7 73 86.3
TAR623G0741 Trochodendron aralioides HOM05D003756 ORTHO05D004304 7.2e-28 126.7 73 86.3
Glyma.03G195700 Glycine max HOM05D003756 ORTHO05D004304 9.4e-28 126.3 71 83.1
Manes.08G025100 Manihot esculenta HOM05D003756 ORTHO05D004304 9.4e-28 126.3 73 82.2
Phvul.001G190200 Phaseolus vulgaris HOM05D003756 ORTHO05D004304 1.6e-27 125.6 71 81.7
QL07p038800 Quercus lobata HOM05D003756 ORTHO05D004304 1.6e-27 125.6 74 79.7
QL07p039050 Quercus lobata HOM05D003756 ORTHO05D004304 1.6e-27 125.6 74 79.7
GSVIVG01033840001 Vitis vinifera HOM05D003756 ORTHO05D004304 1.6e-27 125.6 71 85.9
HanXRQChr02g0054771 Helianthus annuus HOM05D003756 ORTHO05D004304 2.1e-27 125.2 71 85.9
Lalb_Chr20g0111721 Lupinus albus HOM05D003756 ORTHO05D004304 2.1e-27 125.2 75 81.3
Atru.chr8.1539 Acer truncatum HOM05D003756 ORTHO05D004304 2.7e-27 124.8 73 82.2
Potri.004G188700 Populus trichocarpa HOM05D003756 ORTHO05D004304 2.7e-27 124.8 71 81.7
Actinidia07248 Actinidia chinensis HOM05D003756 ORTHO05D004304 3.6e-27 124.4 71 85.9
Lsat_1_v5_gn_1_59380 Lactuca sativa HOM05D003756 ORTHO05D004304 3.6e-27 124.4 71 85.9
Peaxi162Scf00003g00522 Petunia axillaris HOM05D003756 ORTHO05D004304 4.7e-27 124.0 74 83.8
PGR142G3329 Punica granatum HOM05D003756 ORTHO05D004304 4.7e-27 124.0 73 80.8
HPP92_026089 Vanilla planifolia HOM05D003756 ORTHO05D004304 6.1e-27 123.6 71 80.3
arahy.Tifrunner.gnm1.ann1.N59HKK Arachis hypogaea HOM05D003756 ORTHO05D004304 8.0e-27 123.2 95 66.3
Sabra04G0129400 Salix brachista HOM05D003756 ORTHO05D004304 8.0e-27 123.2 71 81.7
Nitab4.5_0000755g0180 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.0e-26 122.9 69 84.1
Oeu002376.1 Olea europaea HOM05D003756 ORTHO05D004304 1.0e-26 122.9 71 80.3
Lsat_1_v5_gn_6_38741 Lactuca sativa HOM05D003756 ORTHO05D004304 1.4e-26 122.5 71 84.5
ECA233G1974 Erigeron canadensis HOM05D003756 ORTHO05D004304 1.8e-26 122.1 69 84.1
ECA248G1642 Erigeron canadensis HOM05D003756 ORTHO05D004304 1.8e-26 122.1 71 80.3
Ah.08g210600 Amaranthus hybridus HOM05D001616 ORTHO05D003701 2.3e-26 121.7 97 64.9
HPP92_025135 Vanilla planifolia HOM05D003756 ORTHO05D004304 2.3e-26 121.7 71 80.3
Actinidia35464 Actinidia chinensis HOM05D003756 ORTHO05D004304 3.0e-26 121.3 71 83.1
Lalb_Chr25g0288331 Lupinus albus HOM05D003756 ORTHO05D004304 4.0e-26 120.9 71 80.3
THA.LOC104804928 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 5.2e-26 120.6 73 80.8
AL5G33490 Arabidopsis lyrata HOM05D003756 ORTHO05D004304 6.8e-26 120.2 73 79.5
AT3G52730 Arabidopsis thaliana HOM05D003756 ORTHO05D004304 6.8e-26 120.2 73 79.5
Carub.0005s1918 Capsella rubella HOM05D003756 ORTHO05D004304 6.8e-26 120.2 73 79.5
CARHR162600 Cardamine hirsuta HOM05D003756 ORTHO05D004304 6.8e-26 120.2 73 79.5
Cc01_g09260 Coffea canephora HOM05D003756 ORTHO05D004304 6.8e-26 120.2 69 78.3
PGSC0003DMG400005923 Solanum tuberosum HOM05D003756 ORTHO05D004304 6.8e-26 120.2 65 87.7
THA.LOC104823490 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 6.8e-26 120.2 73 79.5
TWI53G0293 Tripterygium wilfordii HOM05D003756 ORTHO05D004304 8.8e-26 119.8 79 74.7
CSS0017737 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.2e-25 119.4 71 81.7
CSS0036255 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.2e-25 119.4 71 81.7
RcHm_v2.0_Chr7g0240771 Rosa chinensis HOM05D003756 ORTHO05D004304 2.0e-25 118.6 73 76.7
Dinv42555 Davidia involucrata HOM05D003756 ORTHO05D004304 2.6e-25 118.2 71 80.3
Nitab4.5_0001216g0110 Nicotiana tabacum HOM05D003756 ORTHO05D004304 2.6e-25 118.2 90 68.9
THA.LOC104799762 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 3.4e-25 117.9 73 79.5
Solyc11g068400.2 Solanum lycopersicum HOM05D003756 ORTHO05D004304 4.4e-25 117.5 73 78.1
Sopen11g027120 Solanum pennellii HOM05D003756 ORTHO05D004304 4.4e-25 117.5 73 78.1
CAN.G1358.12 Capsicum annuum HOM05D003756 ORTHO05D004304 9.8e-25 116.3 74 78.4
TAR633G1678 Trochodendron aralioides HOM05D003756 ORTHO05D004304 9.8e-25 116.3 101 60.4
Aa31LG5G21370 Aethionema arabicum HOM05D003756 ORTHO05D004304 1.3e-24 115.9 71 77.5
MD16G1126500 Malus domestica HOM05D003756 ORTHO05D004304 2.8e-24 114.8 66 84.8
CAN.G919.30 Capsicum annuum HOM05D003756 ORTHO05D004304 3.7e-24 114.4 61 83.6
unitig_747.g21944 Utricularia gibba HOM05D003756 ORTHO05D004304 4.9e-24 114.0 73 74.0
SalBow5G5426 Salvia bowleyana HOM05D003756 ORTHO05D004304 1.4e-23 112.5 73 71.2
Glyma.19G194915 Glycine max HOM05D003756 ORTHO05D004304 1.8e-23 112.1 100 59.0
CAN.G1039.16 Capsicum annuum HOM05D003756 ORTHO05D004304 2.4e-23 111.7 73 72.6
CAN.G2235.1 Capsicum annuum HOM05D003756 ORTHO05D004304 4.1e-23 110.9 73 74.0
HanXRQChr14g0451601 Helianthus annuus HOM05D003756 ORTHO05D004304 9.1e-23 109.8 71 76.1
Thhalv10010889m.g Eutrema salsugineum HOM05D003756 ORTHO05D004304 1.2e-22 109.4 63 82.5
COL.COLO4_29737 Corchorus olitorius HOM05D003756 ORTHO05D004304 1.6e-22 109.0 56 91.1
Nitab4.5_0006996g0050 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.6e-22 109.0 56 91.1
Duzib093G1183 Durio zibethinus HOM05D003756 ORTHO05D004304 2.0e-22 108.6 57 94.7
Os05g0400400 Oryza sativa ssp. japonica HOM05D003756 ORTHO05D004304 2.0e-22 108.6 61 78.7
BcaB01g00346 Brassica carinata HOM05D003756 ORTHO05D004304 2.7e-22 108.2 62 83.9
BcaC07g39638 Brassica carinata HOM05D003756 ORTHO05D004304 2.7e-22 108.2 62 83.9
A09p45820 Brassica napus HOM05D003756 ORTHO05D004304 2.7e-22 108.2 62 83.9
C08p28010 Brassica napus HOM05D003756 ORTHO05D004304 2.7e-22 108.2 62 83.9
BolC8t50413H Brassica oleracea HOM05D003756 ORTHO05D004304 2.7e-22 108.2 62 83.9
BraA09t40043Z Brassica rapa HOM05D003756 ORTHO05D004304 2.7e-22 108.2 62 83.9
Zm00001eb196190 Zea mays HOM05D003756 ORTHO05D004304 2.7e-22 108.2 63 77.8
EL10Ac7g16918 Beta vulgaris HOM05D003756 ORTHO05D004304 4.5e-22 107.5 57 84.2
BcaB02g07820 Brassica carinata HOM05D003756 ORTHO05D004304 4.5e-22 107.5 63 81.0
BcaB02g08557 Brassica carinata HOM05D003756 ORTHO05D004304 5.9e-22 107.1 63 81.0
BcaC02g09226 Brassica carinata HOM05D003756 ORTHO05D004304 5.9e-22 107.1 63 81.0
C04p40240 Brassica napus HOM05D003756 ORTHO05D004304 5.9e-22 107.1 63 81.0
BolC4t25600H Brassica oleracea HOM05D003756 ORTHO05D004304 5.9e-22 107.1 63 81.0
CsaV3_6G040700 Cucumis sativus L. HOM05D003756 ORTHO05D004304 5.9e-22 107.1 56 89.3
Sp5g09600 Schrenkiella parvula HOM05D003756 ORTHO05D004304 5.9e-22 107.1 63 81.0
Hund19934 Selenicereus undatus HOM05D003756 ORTHO05D004304 5.9e-22 107.1 56 87.5
A04p06750 Brassica napus HOM05D003756 ORTHO05D004304 7.7e-22 106.7 63 79.4
Zm00001eb093400 Zea mays HOM05D003756 ORTHO05D004304 1.0e-21 106.3 63 76.2
Migut.D02449 Erythranthe guttata HOM05D003756 ORTHO05D004304 1.7e-21 105.5 73 71.2
Nitab4.5_0000132g0030 Nicotiana tabacum HOM05D003756 ORTHO05D004304 2.3e-21 105.1 83 66.3
TPR.G19525 Trifolium pratense HOM05D003756 ORTHO05D004304 2.9e-21 104.8 56 85.7
Sc02g0000240 Simmondsia chinensis HOM05D003756 ORTHO05D004304 8.6e-21 103.2 56 85.7
Sabra09G0117900 Salix brachista HOM05D003756 ORTHO05D004304 1.1e-20 102.8 56 82.1
Actinidia37081 Actinidia chinensis HOM05D003756 ORTHO05D004304 4.2e-20 100.9 56 87.5
Oeu035551.2 Olea europaea HOM05D003756 ORTHO05D004304 4.2e-20 100.9 56 83.9
SEGI_29748 Sequoiadendron giganteum HOM05D003756 ORTHO05D004304 5.5e-20 100.5 58 75.9
CAN.G28765.1 Capsicum annuum HOM05D003756 ORTHO05D004304 2.8e-19 98.2 75 68.0
Dinv29482 Davidia involucrata HOM05D003756 ORTHO05D004304 2.8e-19 98.2 56 83.9
ECA238G2045 Erigeron canadensis HOM05D003756 ORTHO05D004304 2.8e-19 98.2 65 70.8
Rhsim01G0205100 Rhododendron simsii HOM05D003756 ORTHO05D004304 8.0e-19 96.7 56 78.6
PGSC0003DMG400026342 Solanum tuberosum HOM05D003756 ORTHO05D004304 8.0e-19 96.7 61 75.4
PSO339G6416 Papaver somniferum HOM05D003756 ORTHO05D004304 1.0e-18 96.3 64 71.9
PSO384G4395 Papaver somniferum HOM05D003756 ORTHO05D004304 1.0e-18 96.3 64 71.9
Ciclev10013189m.g Citrus clementina HOM05D003756 ORTHO05D004304 1.8e-18 95.5 56 76.8
Hma1.2p1_0578F.1_g182500 Hydrangea macrophylla HOM05D003756 ORTHO05D004304 3.0e-18 94.7 56 82.1
Mapoly0074s0034 Marchantia polymorpha HOM05D003756 ORTHO05D004304 6.8e-18 93.6 66 62.1
ATR0796G241 Amborella trichopoda HOM05D003756 ORTHO05D004304 8.9e-18 93.2 56 78.6
Sp4g18470 Schrenkiella parvula HOM05D003756 ORTHO05D004304 1.5e-17 92.4 56 76.8
Nitab4.5_0000963g0100 Nicotiana tabacum HOM05D003756 ORTHO05D004304 2.0e-17 92.0 56 75.0
FAN13G0109 Fragaria x ananassa HOM05D003756 ORTHO05D004304 2.6e-17 91.7 58 77.6
Rhsim13G0111400 Rhododendron simsii HOM05D003756 ORTHO05D004304 3.4e-17 91.3 89 52.8
SEGI_32530 Sequoiadendron giganteum HOM05D003756 ORTHO05D004304 2.2e-16 88.6 67 64.2
Hma1.2p1_0084F.1_g043780 Hydrangea macrophylla HOM05D003756 ORTHO05D004304 1.8e-15 85.5 56 69.6
SalBow6G3312 Salvia bowleyana HOM05D003756 ORTHO05D004304 4.1e-15 84.3 56 64.3
BraA04t16378Z Brassica rapa HOM05D003756 ORTHO05D004304 1.2e-14 82.8 49 75.5
Pp3c7_2560 Physcomitrium patens HOM05D003756 ORTHO05D004304 1.6e-14 82.4 62 54.8
Pp3c11_23610 Physcomitrium patens HOM05D003756 ORTHO05D004304 2.0e-14 82.0 67 50.7
FAN04G2029 Fragaria x ananassa HOM05D003756 ORTHO05D004304 7.8e-14 80.1 58 70.7
MELO3C032936.2 Cucumis melo HOM05D003756 ORTHO05D004304 1.7e-13 79.0 40 87.5
FAN04G1204 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.7e-13 79.0 55 69.1
PSO478G0414 Papaver somniferum HOM05D003756 ORTHO05D004304 2.9e-13 78.2 51 66.7
CBR_g21065 Chara braunii HOM05D003756 ORTHO05D004304 5.0e-13 77.4 63 58.7
FAN13G3094 Fragaria x ananassa HOM05D003756 ORTHO05D004304 6.6e-13 77.0 52 73.1
FAN21G3678 Fragaria x ananassa HOM05D002333 ORTHO05D004304 6.6e-13 77.0 45 88.9
RcHm_v2.0_Chr7g0240761 Rosa chinensis HOM05D003756 ORTHO05D004304 1.2e-11 72.8 40 85.0
Dinv33579 Davidia involucrata HOM05D003756 ORTHO05D004304 2.8e-11 71.6 38 81.6
Nn2g14157 Nelumbo nucifera HOM05D003756 ORTHO05D004304 1.4e-10 69.3 34 91.2
Aa31LG10G7740 Aethionema arabicum HOM05D003756 ORTHO05D004304 2.9e-08 61.6 40 70.0
MCO16G664 Micromonas commoda HOM05D003756 ORTHO05D004304 3.2e-07 58.2 51 52.9


User provided reference genes

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