Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.2e-39 166.0 82 100.0
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 2.5e-37 158.3 82 96.3
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 7.8e-31 136.7 81 82.7
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.7e-30 135.6 81 82.7
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 3.0e-30 134.8 82 76.8
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.9e-30 134.4 82 74.4
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 6.6e-30 133.7 82 73.2
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 8.7e-30 133.3 82 80.5
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.1e-29 132.9 82 75.6
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.1e-29 132.9 82 76.8
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.1e-29 132.9 82 73.2
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.5e-29 132.5 82 75.6
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.9e-29 132.1 82 79.3
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.3e-29 131.3 82 73.2
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 9.6e-29 129.8 82 78.0
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 9.6e-29 129.8 82 73.2
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.3e-28 129.4 82 78.0
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 1.6e-28 129.0 82 73.2
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.6e-28 129.0 82 74.4
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.6e-28 129.0 82 73.2
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.1e-28 128.6 82 73.2
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.1e-28 128.6 82 73.2
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 2.1e-28 128.6 82 73.2
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 2.1e-28 128.6 82 75.6
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 2.1e-28 128.6 82 70.7
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 2.8e-28 128.3 82 75.6
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 3.6e-28 127.9 82 74.4
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 4.8e-28 127.5 82 73.2
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 4.8e-28 127.5 82 70.7
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 8.1e-28 126.7 82 73.2
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 8.1e-28 126.7 81 70.4
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 8.1e-28 126.7 82 68.3
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 8.1e-28 126.7 82 73.2
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.1e-27 126.3 82 70.7
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.1e-27 126.3 81 70.4
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.4e-27 125.9 82 72.0
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.4e-27 125.9 82 72.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.8e-27 125.6 82 70.7
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 2.4e-27 125.2 79 73.4
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.4e-27 125.2 82 72.0
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 5.3e-27 124.0 82 68.3
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 5.3e-27 124.0 83 69.9
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 6.9e-27 123.6 82 73.2
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 6.9e-27 123.6 82 69.5
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 9.0e-27 123.2 83 71.1
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 9.0e-27 123.2 82 70.7
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.2e-26 122.9 80 76.2
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.2e-26 122.9 82 68.3
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.5e-26 122.5 78 73.1
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.5e-26 122.5 79 68.4
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.0e-26 122.1 82 69.5
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 4.5e-26 120.9 76 71.1
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 4.5e-26 120.9 82 67.1
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.8e-26 120.6 81 69.1
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 5.8e-26 120.6 82 72.0
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 9.9e-26 119.8 82 72.0
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 8.4e-25 116.7 82 67.1
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.1e-24 116.3 82 65.9
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.1e-24 116.3 82 68.3
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 1.4e-24 115.9 79 69.6
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 1.4e-24 115.9 79 69.6
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.9e-24 115.5 82 65.9
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 2.4e-24 115.2 82 67.1
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.2e-24 114.8 81 64.2
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.2e-24 114.8 81 64.2
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.2e-24 114.8 86 64.0
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 7.1e-24 113.6 82 67.1
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 9.3e-24 113.2 82 64.6
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.6e-23 112.5 83 66.3
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 2.1e-23 112.1 79 65.8
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.7e-23 111.7 81 70.4
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 7.9e-23 110.2 82 63.4
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.0e-22 109.8 82 58.5
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 1.8e-22 109.0 84 64.3
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 3.0e-22 108.2 80 63.8
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 3.9e-22 107.8 82 61.0
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 3.9e-22 107.8 82 61.0
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 1.9e-21 105.5 73 65.8
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 8.1e-20 100.1 84 57.1
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 8.1e-20 100.1 84 57.1
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 8.1e-20 100.1 80 60.0
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.8e-19 99.0 85 55.3
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.8e-19 99.0 85 55.3
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 1.8e-19 99.0 85 55.3
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.8e-19 99.0 85 55.3
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 3.1e-19 98.2 84 60.7
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 4.0e-19 97.8 84 54.8
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 9.0e-19 96.7 83 60.2
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.2e-18 96.3 83 59.0
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.5e-18 95.9 83 55.4
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.6e-18 95.1 82 57.3
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 3.4e-18 94.7 82 56.1
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 4.5e-18 94.4 82 56.1
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 7.6e-18 93.6 83 57.8
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 8.4e-17 90.1 74 58.1
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 8.4e-17 90.1 82 53.7
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 1.9e-16 89.0 80 56.2
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 3.5e-15 84.7 79 49.4
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.0e-14 83.2 81 51.9
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 6.7e-14 80.5 80 47.5
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 2.4e-11 72.0 51 62.7
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 8.4e-09 63.5 52 55.8


User provided reference genes

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