Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 3.6e-149 531.6 266 100.0
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 4.4e-91 338.6 262 69.8
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 4.7e-85 318.5 263 66.2
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 6.2e-85 318.2 263 66.2
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.4e-84 317.0 263 66.2
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 4.3e-78 295.4 222 65.3
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.4e-76 290.4 271 60.5
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 7.6e-75 284.6 216 72.2
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.3e-74 283.9 257 63.4
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 3.2e-73 279.3 203 68.0
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 3.2e-73 279.3 209 66.0
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 3.2e-73 279.3 256 59.0
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 9.2e-73 277.7 257 58.8
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.2e-72 277.3 263 57.4
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 1.2e-72 277.3 219 63.5
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 6.0e-72 275.0 237 62.9
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.9e-70 270.0 201 68.2
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 4.3e-70 268.9 222 64.0
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 5.6e-70 268.5 199 66.8
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.2e-69 267.3 228 61.4
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.8e-69 266.2 178 71.3
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 4.7e-69 265.4 270 56.3
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 4.7e-69 265.4 259 57.1
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 6.2e-69 265.0 265 55.8
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 8.1e-69 264.6 205 66.3
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 6.9e-68 261.5 200 66.0
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 6.9e-68 261.5 246 57.7
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 1.2e-67 260.8 254 58.3
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 2.0e-67 260.0 200 65.0
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 4.4e-67 258.8 201 62.2
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 4.4e-67 258.8 234 58.5
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 1.3e-66 257.3 260 59.2
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 1.7e-66 256.9 238 56.7
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 2.2e-66 256.5 179 68.2
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 2.2e-66 256.5 250 59.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 2.2e-66 256.5 260 54.2
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 2.9e-66 256.1 256 58.6
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 3.8e-66 255.8 179 68.7
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.4e-65 253.8 256 55.5
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 1.4e-65 253.8 180 69.4
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.9e-65 253.4 258 56.6
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 4.2e-65 252.3 222 59.0
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 4.2e-65 252.3 210 61.0
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 5.4e-65 251.9 210 61.0
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 5.4e-65 251.9 220 59.5
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 7.1e-65 251.5 203 62.1
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 9.3e-65 251.1 258 55.8
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 9.3e-65 251.1 258 57.0
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 1.2e-64 250.8 179 68.2
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.6e-64 250.4 178 67.4
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.6e-64 250.4 265 55.5
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 2.1e-64 250.0 177 67.2
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 2.7e-64 249.6 258 56.2
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 3.5e-64 249.2 201 63.7
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 4.6e-64 248.8 180 63.9
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 6.0e-64 248.4 205 61.5
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 7.8e-64 248.1 178 66.9
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 1.7e-63 246.9 200 63.5
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 2.3e-63 246.5 180 63.3
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 3.0e-63 246.1 263 51.7
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 3.9e-63 245.7 193 62.7
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 5.1e-63 245.4 260 55.4
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 6.6e-63 245.0 245 53.9
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.1e-62 244.2 178 65.2
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 1.5e-62 243.8 181 64.1
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 7.3e-62 241.5 173 66.5
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 9.6e-62 241.1 179 64.2
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 9.6e-62 241.1 180 62.8
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 8.1e-61 238.0 180 63.3
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 8.1e-61 238.0 265 52.1
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.1e-60 237.7 265 52.1
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 2.4e-60 236.5 177 61.6
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 5.3e-60 235.3 179 62.0
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 6.9e-60 235.0 179 60.9
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 2.0e-59 233.4 174 62.6
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.6e-56 223.8 252 49.6
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.3e-55 220.7 265 51.7
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 5.1e-55 218.8 182 62.1
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.1e-54 217.6 196 56.1
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.1e-52 211.1 180 57.8
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.2e-51 207.6 180 55.0
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 2.4e-49 199.9 180 54.4
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 3.2e-49 199.5 180 56.1
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 3.2e-49 199.5 182 60.4
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.0e-47 194.5 182 51.6
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.9e-47 192.6 125 77.6
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 3.9e-47 192.6 337 37.7
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.0e-43 180.3 171 49.7
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 7.2e-33 145.2 174 54.0
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.4e-31 141.0 121 57.9
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 1.7e-29 134.0 122 57.4
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 8.2e-29 131.7 150 48.0
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 1.8e-23 114.0 123 52.0
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 3.4e-19 99.8 69 71.0
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 3.4e-19 99.8 52 80.8
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 7.7e-19 98.6 138 49.3
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 8.8e-15 85.1 127 39.4
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 2.8e-13 80.1 70 60.0
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 8.5e-10 68.6 62 61.3


User provided reference genes

Program Settings