Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD12G1007100 Malus domestica HOM05D006514 ORTHO05D008138 3.7e-27 124.0 57 100.0
TWI12G0206 Tripterygium wilfordii HOM05D006514 ORTHO05D008138 4.1e-10 67.4 34 79.4
MD11G1070700 Malus domestica HOM05D006514 ORTHO05D008138 1.5e-09 65.5 36 83.3
MD03G1065900 Malus domestica HOM05D006514 ORTHO05D008138 1.3e-08 62.4 36 77.8
Eucgr.F04183 Eucalyptus grandis HOM05D006514 ORTHO05D008138 1.7e-08 62.0 44 68.2
Manes.05G162000 Manihot esculenta HOM05D006514 ORTHO05D008138 2.9e-08 61.2 34 73.5
TWI36G0631 Tripterygium wilfordii HOM05D006514 ORTHO05D008138 5.0e-08 60.5 34 73.5
FvH4_3g38980 Fragaria vesca HOM05D006514 ORTHO05D008138 8.5e-08 59.7 34 76.5
FAN16G2060 Fragaria x ananassa HOM05D006514 ORTHO05D008138 8.5e-08 59.7 34 76.5
FAN21G1628 Fragaria x ananassa HOM05D006514 ORTHO05D008138 8.5e-08 59.7 34 76.5
Potri.001G000400 Populus trichocarpa HOM05D006514 ORTHO05D008138 8.5e-08 59.7 34 73.5
Potri.002G263300 Populus trichocarpa HOM05D006514 ORTHO05D008138 8.5e-08 59.7 34 73.5
RcHm_v2.0_Chr7g0176991 Rosa chinensis HOM05D006514 ORTHO05D008138 8.5e-08 59.7 34 76.5
Gohir.A03G078101 Gossypium hirsutum HOM05D006514 ORTHO05D008138 1.1e-07 59.3 34 79.4
Gohir.D02G094200 Gossypium hirsutum HOM05D006514 ORTHO05D008138 1.1e-07 59.3 34 76.5
Gorai.005G107100 Gossypium raimondii HOM05D006514 ORTHO05D008138 1.1e-07 59.3 34 76.5
Prupe.6G054600 Prunus persica HOM05D006514 ORTHO05D008138 1.1e-07 59.3 38 68.4
Gohir.A01G116600 Gossypium hirsutum HOM05D006514 ORTHO05D008138 1.4e-07 58.9 45 62.2
Gohir.D01G105000 Gossypium hirsutum HOM05D006514 ORTHO05D008138 1.4e-07 58.9 45 62.2
Gorai.002G129000 Gossypium raimondii HOM05D006514 ORTHO05D008138 1.4e-07 58.9 45 62.2
SHI24607 Sapria himalayana HOM05D006514 ORTHO05D008138 1.4e-07 58.9 35 71.4
Dinv36061 Davidia involucrata HOM05D006514 ORTHO05D008138 2.5e-07 58.2 34 76.5
Duzib041G0253 Durio zibethinus HOM05D006514 ORTHO05D008138 2.5e-07 58.2 34 73.5
Migut.N00499 Erythranthe guttata HOM05D006514 ORTHO05D008138 2.5e-07 58.2 34 73.5
CiPaw.07G206900 Carya illinoinensis HOM05D006514 ORTHO05D008138 5.5e-07 57.0 34 70.6
Cc07_g09230 Coffea canephora HOM05D006514 ORTHO05D008138 5.5e-07 57.0 32 75.0
QL12p026537 Quercus lobata HOM05D006514 ORTHO05D008138 5.5e-07 57.0 34 76.5
QL12p026562 Quercus lobata HOM05D006514 ORTHO05D008138 5.5e-07 57.0 34 76.5
MSTRG.24295 Avicennia marina HOM05D006514 ORTHO05D008138 7.2e-07 56.6 57 49.1
PGR004G0716 Punica granatum HOM05D006514 ORTHO05D008138 7.2e-07 56.6 32 71.9
RcHm_v2.0_Chr5g0070251 Rosa chinensis HOM05D006514 ORTHO05D008138 7.2e-07 56.6 34 73.5
Cc10_g03090 Coffea canephora HOM05D006514 ORTHO05D008138 9.4e-07 56.2 34 64.7
unitig_85.g27236 Utricularia gibba HOM05D006514 ORTHO05D008138 9.4e-07 56.2 32 75.0
Duzib093G1568 Durio zibethinus HOM05D000207 ORTHO05D001482 1.2e-06 55.8 34 70.6
Hma1.2p1_0023F.1_g014910 Hydrangea macrophylla HOM05D006514 ORTHO05D008138 1.2e-06 55.8 34 73.5
Thecc.08G024100 Theobroma cacao HOM05D006514 ORTHO05D008138 1.2e-06 55.8 34 70.6
Duzib116G0168 Durio zibethinus HOM05D006514 ORTHO05D008138 1.6e-06 55.5 34 70.6
Hma1.2p1_0203F.1_g086530 Hydrangea macrophylla HOM05D006514 ORTHO05D008138 2.7e-06 54.7 34 70.6
GSVIVG01037960001 Vitis vinifera HOM05D006514 ORTHO05D008138 2.7e-06 54.7 34 73.5
Potri.002G263100 Populus trichocarpa HOM05D006514 ORTHO05D008138 3.6e-06 54.3 34 67.6
CsaV3_5G038690 Cucumis sativus L. HOM05D006514 ORTHO05D008138 6.1e-06 53.5 34 64.7
DCAR_025932 Daucus carota HOM05D006514 ORTHO05D008138 7.9e-06 53.1 35 60.0
Oeu009866.1 Olea europaea HOM05D006514 ORTHO05D008138 7.9e-06 53.1 31 71.0
SalBow8G0801 Salvia bowleyana HOM05D006514 ORTHO05D008138 7.9e-06 53.1 31 67.7
Sed0005431 Sechium edule HOM05D006514 ORTHO05D008138 7.9e-06 53.1 34 67.6


User provided reference genes

Program Settings