Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1311600 Malus domestica HOM05D005096 ORTHO05D006566 1.1e-111 406.8 217 100.0
MD11G1286100 Malus domestica HOM05D005096 ORTHO05D006566 4.4e-105 384.8 217 96.3
Prupe.8G241300 Prunus persica HOM05D005096 ORTHO05D006566 2.6e-97 359.0 217 88.5
FAN20G2556 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.6e-86 323.2 219 80.8
FAN27G2515 Fragaria x ananassa HOM05D005096 ORTHO05D006566 4.6e-86 321.6 219 80.4
FAN15G1882 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.0e-85 320.5 219 80.4
FvH4_2g23600 Fragaria vesca HOM05D005096 ORTHO05D006566 5.0e-85 318.2 219 79.9
RcHm_v2.0_Chr6g0291071 Rosa chinensis HOM05D005096 ORTHO05D006566 5.0e-85 318.2 219 80.8
FAN24G2260 Fragaria x ananassa HOM05D005096 ORTHO05D006566 1.5e-84 316.6 219 79.5
MD11G1312200 Malus domestica HOM05D005096 ORTHO05D006566 6.2e-75 284.6 172 90.7
Haze_04712 Corylus avellana HOM05D005096 ORTHO05D006566 4.0e-74 282.0 219 69.9
CiPaw.07G091400 Carya illinoinensis HOM05D005096 ORTHO05D006566 6.8e-74 281.2 219 70.3
GSVIVG01011085001 Vitis vinifera HOM05D005096 ORTHO05D006566 1.5e-73 280.0 219 68.5
CANSAT25G0791 Cannabis sativa HOM05D005096 ORTHO05D006566 2.6e-73 279.3 219 70.3
Cfa006136 Carpinus fangiana HOM05D005096 ORTHO05D006566 2.6e-73 279.3 219 68.9
Sabra05G0159300 Salix brachista HOM05D005096 ORTHO05D006566 2.6e-73 279.3 218 67.4
Duzib138G0773 Durio zibethinus HOM05D005096 ORTHO05D006566 9.8e-73 277.3 219 67.1
Potri.005G209200 Populus trichocarpa HOM05D005096 ORTHO05D006566 9.8e-73 277.3 218 67.0
Dinv32937 Davidia involucrata HOM05D005096 ORTHO05D006566 2.1e-70 269.6 218 68.3
QL12p021914 Quercus lobata HOM05D005096 ORTHO05D006566 2.1e-70 269.6 217 67.3
Atru.chr5.1434 Acer truncatum HOM05D005096 ORTHO05D006566 2.7e-70 269.2 219 65.3
Lj2A1173G9 Lonicera japonica HOM05D005096 ORTHO05D006566 2.7e-70 269.2 219 65.8
CSS0045500 Camellia sinensis var. sinensis HOM05D005096 ORTHO05D006566 6.0e-70 268.1 219 67.6
COL.COLO4_09099 Corchorus olitorius HOM05D005096 ORTHO05D006566 7.8e-70 267.7 218 65.6
TAR633G0362 Trochodendron aralioides HOM05D005096 ORTHO05D006566 1.0e-69 267.3 216 68.1
Manes.05G076137 Manihot esculenta HOM05D005096 ORTHO05D006566 2.3e-69 266.2 219 63.5
Aqoxy2G03326 Aquilegia oxysepala HOM05D005096 ORTHO05D006566 5.1e-69 265.0 217 65.4
ClCG07G000240 Citrullus lanatus HOM05D005096 ORTHO05D006566 5.1e-69 265.0 216 66.7
TWI23G0916 Tripterygium wilfordii HOM05D005096 ORTHO05D006566 8.6e-69 264.2 217 65.0
Duzib133G0424 Durio zibethinus HOM05D005096 ORTHO05D006566 2.5e-68 262.7 217 64.1
MELO3C014401.2 Cucumis melo HOM05D005096 ORTHO05D006566 5.6e-68 261.5 216 64.8
CsaV3_6G037120 Cucumis sativus L. HOM05D005096 ORTHO05D006566 1.6e-67 260.0 214 65.0
Rhsim13G0024600 Rhododendron simsii HOM05D005096 ORTHO05D006566 3.6e-67 258.8 219 66.2
vmacro02569 Vaccinium macrocarpon HOM05D005096 ORTHO05D006566 6.2e-67 258.1 217 65.4
Gohir.D08G075900 Gossypium hirsutum HOM05D005096 ORTHO05D006566 1.1e-66 257.3 219 62.6
Duzib133G0542 Durio zibethinus HOM05D005096 ORTHO05D006566 1.4e-66 256.9 217 62.7
Thecc.01G279600 Theobroma cacao HOM05D005096 ORTHO05D006566 2.3e-66 256.1 219 63.0
Gorai.004G080200 Gossypium raimondii HOM05D005096 ORTHO05D006566 5.2e-66 255.0 219 62.1
Oeu022870.1 Olea europaea HOM05D005096 ORTHO05D006566 2.0e-65 253.1 215 63.3
Cc01_g19500 Coffea canephora HOM05D005096 ORTHO05D006566 9.9e-65 250.8 218 63.8
Actinidia09139 Actinidia chinensis HOM05D005096 ORTHO05D006566 2.2e-64 249.6 217 62.2
Eucgr.H01482 Eucalyptus grandis HOM05D005096 ORTHO05D006566 1.1e-63 247.3 219 62.1
arahy.Tifrunner.gnm1.ann1.2R7T4K Arachis hypogaea HOM05D005096 ORTHO05D006566 1.4e-63 246.9 217 59.4
Actinidia00750 Actinidia chinensis HOM05D005096 ORTHO05D006566 3.2e-63 245.7 217 61.8
Nitab4.5_0000458g0050 Nicotiana tabacum HOM05D005096 ORTHO05D006566 4.1e-63 245.4 216 61.6
DCAR_002736 Daucus carota HOM05D005096 ORTHO05D006566 7.1e-63 244.6 219 60.7
SalBow4G0282 Salvia bowleyana HOM05D005096 ORTHO05D006566 7.1e-63 244.6 212 61.8
Glyma.02G147400 Glycine max HOM05D005096 ORTHO05D006566 3.9e-61 238.8 219 59.8
Migut.D00294 Erythranthe guttata HOM05D005096 ORTHO05D006566 5.1e-61 238.4 214 61.7
Nitab4.5_0008435g0030 Nicotiana tabacum HOM05D005096 ORTHO05D006566 6.6e-61 238.0 216 59.3
Glyma.10G026400 Glycine max HOM05D005096 ORTHO05D006566 1.1e-60 237.3 219 59.4
MD00G1063200 Malus domestica HOM05D005096 ORTHO05D006566 1.5e-60 236.9 127 97.6
Phvul.007G172000 Phaseolus vulgaris HOM05D005096 ORTHO05D006566 1.5e-60 236.9 219 59.8
Ca_09758_v3 Cicer arietinum L. HOM05D005096 ORTHO05D006566 1.9e-60 236.5 214 60.3
ECA247G0546 Erigeron canadensis HOM05D005096 ORTHO05D006566 2.5e-60 236.1 215 57.7
HanXRQChr10g0282661 Helianthus annuus HOM05D005096 ORTHO05D006566 2.5e-60 236.1 219 57.1
CAN.G242.2 Capsicum annuum HOM05D005096 ORTHO05D006566 1.2e-59 233.8 214 59.8
Sed0025205 Sechium edule HOM05D005096 ORTHO05D006566 1.6e-59 233.4 215 60.0
Medtr1g072270 Medicago truncatula HOM05D005096 ORTHO05D006566 3.6e-59 232.3 214 57.5
Ciclev10023868m.g Citrus clementina HOM05D005096 ORTHO05D006566 4.7e-59 231.9 196 63.8
THA.LOC104801235 Tarenaya hassleriana HOM05D005096 ORTHO05D006566 4.7e-59 231.9 220 58.2
ATR0626G051 Amborella trichopoda HOM05D005096 ORTHO05D006566 1.4e-58 230.3 217 57.1
MSTRG.21562 Avicennia marina HOM05D005096 ORTHO05D006566 1.4e-58 230.3 212 59.4
Lj5g0021757 Lotus japonicus HOM05D005096 ORTHO05D006566 3.1e-58 229.2 216 57.9
Sopen09g026860 Solanum pennellii HOM05D005096 ORTHO05D006566 6.9e-58 228.0 219 57.5
AUR62043137 Chenopodium quinoa HOM05D005096 ORTHO05D006566 8.9e-58 227.6 216 58.3
Sc05g0004960 Simmondsia chinensis HOM05D005096 ORTHO05D006566 8.9e-58 227.6 218 55.5
EL10Ac7g17230 Beta vulgaris HOM05D005096 ORTHO05D006566 2.0e-57 226.5 220 56.4
AUR62036827 Chenopodium quinoa HOM05D005096 ORTHO05D006566 2.6e-57 226.1 216 57.9
Hund05342 Selenicereus undatus HOM05D005096 ORTHO05D006566 3.4e-57 225.7 219 57.1
Ah.15g091940 Amaranthus hybridus HOM05D005096 ORTHO05D006566 4.4e-57 225.3 215 57.2
Lsat_1_v5_gn_9_3760 Lactuca sativa HOM05D005096 ORTHO05D006566 9.9e-57 224.2 217 55.3
VMungo0720G0024 Vigna mungo HOM05D005096 ORTHO05D006566 1.3e-56 223.8 219 56.6
TPR.G9125 Trifolium pratense HOM05D005096 ORTHO05D006566 2.2e-56 223.0 214 56.1
arahy.Tifrunner.gnm1.ann1.TN9YNV Arachis hypogaea HOM05D005096 ORTHO05D006566 3.8e-56 222.2 282 46.1
Peaxi162Scf01607g00116 Petunia axillaris HOM05D005096 ORTHO05D006566 4.9e-56 221.9 227 56.8
Aa31LG1G9370 Aethionema arabicum HOM05D005096 ORTHO05D006566 6.4e-56 221.5 218 54.6
PSO302G0140 Papaver somniferum HOM05D005096 ORTHO05D006566 5.4e-55 218.4 193 62.2
PSO170G0567 Papaver somniferum HOM05D005096 ORTHO05D006566 2.7e-54 216.1 196 61.2
A08p37450 Brassica napus HOM05D005096 ORTHO05D006566 4.6e-54 215.3 217 53.9
BraA08t35643Z Brassica rapa HOM05D005096 ORTHO05D006566 4.6e-54 215.3 217 53.9
Lalb_Chr02g0142781 Lupinus albus HOM05D005096 ORTHO05D006566 4.6e-54 215.3 219 54.8
Sabra05G0150000 Salix brachista HOM05D005096 ORTHO05D006566 4.6e-54 215.3 163 71.8
Sp1g02185 Schrenkiella parvula HOM05D005096 ORTHO05D006566 4.6e-54 215.3 218 52.8
unitig_0.g1141 Utricularia gibba HOM05D005096 ORTHO05D003974 7.8e-54 214.5 213 55.4
CARHR002500 Cardamine hirsuta HOM05D005096 ORTHO05D006566 1.7e-53 213.4 218 52.8
BolC8t46843H Brassica oleracea HOM05D005096 ORTHO05D006566 2.3e-53 213.0 217 53.5
Carub.0001s0230 Capsella rubella HOM05D005096 ORTHO05D006566 2.3e-53 213.0 218 53.2
C08p00440 Brassica napus HOM05D005096 ORTHO05D006566 3.9e-53 212.2 217 53.5
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 3.3e-52 209.1 214 55.6
AL1G12650 Arabidopsis lyrata HOM05D005096 ORTHO05D006566 4.3e-52 208.8 218 51.4
Thhalv10006729m.g Eutrema salsugineum HOM05D005096 ORTHO05D006566 9.6e-52 207.6 217 52.1
Potri.002G053366 Populus trichocarpa HOM05D005096 ORTHO05D006566 2.1e-51 206.5 173 66.5
CDE06G0317 Ceratophyllum demersum HOM05D005096 ORTHO05D006566 3.6e-51 205.7 216 51.9
Os05g0390100 Oryza sativa ssp. japonica HOM05D005096 ORTHO05D006566 1.5e-49 200.3 219 49.3
Zm00001eb287190 Zea mays HOM05D005096 ORTHO05D006566 3.5e-46 189.1 219 49.3
SGA_v2.0_scaffold1G00471 Striga asiatica HOM05D005096 ORTHO05D006566 1.6e-43 180.3 163 62.0
SEGI_13636 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 1.4e-39 167.2 219 45.2
Cpa.g.c44243 Carica papaya HOM05D005096 ORTHO05D006566 4.2e-39 165.6 132 65.9
arahy.Tifrunner.gnm1.ann1.VTSW9N Arachis hypogaea HOM05D005096 ORTHO05D006566 1.9e-36 156.8 132 62.9
Pp3c10_17390 Physcomitrium patens HOM05D005096 ORTHO05D006566 7.4e-36 154.8 225 39.1
Mapoly0002s0267 Marchantia polymorpha HOM05D005096 ORTHO05D006566 1.6e-35 153.7 221 39.4
Pp3c3_25850 Physcomitrium patens HOM05D005096 ORTHO05D006566 1.6e-35 153.7 226 38.5
AagrBONN_evm.TU.Sc2ySwM_228.961 Anthoceros agrestis HOM05D005096 ORTHO05D006566 3.7e-35 152.5 219 38.4
MBI19_g21295_MAGBIO Magnolia biondii HOM05D005096 ORTHO05D006566 5.3e-34 148.7 125 64.8
SMO147G0152 Selaginella moellendorffii HOM05D005096 ORTHO05D006566 2.5e-31 139.8 212 40.1
AUR62043139 Chenopodium quinoa HOM05D005096 ORTHO05D006566 4.8e-27 125.6 122 59.8
TAR362G0796 Trochodendron aralioides HOM05D005096 ORTHO05D006566 2.0e-25 120.2 97 70.1
Psat6g060000 Pisum sativum HOM05D005096 ORTHO05D006566 5.9e-25 118.6 120 56.7
Sabra02G0043400 Salix brachista HOM05D005096 ORTHO05D006566 3.8e-24 115.9 145 52.4
CBR_g4009 Chara braunii HOM05D005096 ORTHO05D006566 4.6e-22 109.0 234 30.3
PGR119G0033 Punica granatum HOM05D005096 ORTHO05D006566 1.4e-18 97.4 89 57.3
Cpa.g.sc52.38 Carica papaya HOM05D005096 ORTHO05D006566 4.1e-18 95.9 86 60.5
Hund05341 Selenicereus undatus HOM05D005096 ORTHO05D006566 3.8e-16 89.4 70 74.3
Gohir.A08G067500 Gossypium hirsutum HOM05D005096 ORTHO05D006566 5.5e-15 85.5 86 48.8
Cpa.g.c40412 Carica papaya HOM05D005096 ORTHO05D006566 2.8e-11 73.2 66 57.6
SEGI_40401 Sequoiadendron giganteum HOM05D005096 ORTHO05D006566 6.3e-11 72.0 128 39.1
Solyc09g065160.4 Solanum lycopersicum HOM05D005096 ORTHO05D006566 5.3e-10 68.9 86 43.0
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 5.0e-08 62.4 63 54.0
arahy.Tifrunner.gnm1.ann1.8W9TWR Arachis hypogaea HOM05D005096 ORTHO05D006566 1.4e-07 60.8 60 50.0
MCO02G198 Micromonas commoda HOM05D005096 ORTHO05D006566 3.2e-07 59.7 149 25.5


User provided reference genes

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