Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 9.8e-50 199.9 106 100.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 4.1e-40 167.9 106 84.0
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.7e-38 162.5 101 82.2
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 2.1e-36 155.6 102 78.4
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.1e-36 155.6 101 80.2
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.4e-35 152.9 102 78.4
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 1.8e-35 152.5 106 75.5
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 1.8e-35 152.5 98 78.6
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 2.3e-35 152.1 106 75.5
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 3.0e-35 151.8 102 78.4
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 8.9e-35 150.2 102 78.4
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 8.9e-35 150.2 102 78.4
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.2e-34 149.8 102 75.5
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.2e-34 149.8 102 75.5
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 1.5e-34 149.4 103 71.8
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.5e-34 149.4 102 74.5
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 1.5e-34 149.4 98 77.6
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.6e-34 148.7 102 77.5
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.6e-34 148.7 102 77.5
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 3.4e-34 148.3 98 76.5
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 3.4e-34 148.3 103 76.7
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 4.4e-34 147.9 102 75.5
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 7.5e-34 147.1 102 73.5
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 7.5e-34 147.1 101 77.2
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 7.5e-34 147.1 101 76.2
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 9.8e-34 146.7 102 74.5
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.3e-33 146.4 106 71.7
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 1.3e-33 146.4 103 70.9
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 1.3e-33 146.4 103 71.8
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.3e-33 146.4 100 75.0
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.7e-33 146.0 98 77.6
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.7e-33 146.0 102 72.5
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.2e-33 145.6 102 72.5
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 2.2e-33 145.6 99 72.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 2.9e-33 145.2 98 75.5
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 4.9e-33 144.4 102 74.5
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.9e-33 144.4 102 73.5
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 8.3e-33 143.7 105 70.5
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 1.1e-32 143.3 105 69.5
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-32 143.3 105 69.5
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 1.1e-32 143.3 105 69.5
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 1.1e-32 143.3 105 69.5
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 1.1e-32 143.3 98 73.5
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 1.1e-32 143.3 98 73.5
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 1.8e-32 142.5 105 69.5
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 2.4e-32 142.1 101 72.3
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 2.4e-32 142.1 105 68.6
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 71.6
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 2.4e-32 142.1 102 73.5
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 3.2e-32 141.7 106 69.8
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 4.1e-32 141.4 103 68.9
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 70.5
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 5.4e-32 141.0 106 68.9
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 68.6
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 7.0e-32 140.6 106 67.9
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 9.2e-32 140.2 105 67.6
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.2e-31 139.8 102 71.6
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.6e-31 139.4 98 73.5
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.6e-31 139.4 96 74.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 2.0e-31 139.0 103 68.9
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 2.7e-31 138.7 103 68.9
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.5e-31 138.3 106 66.0
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 3.5e-31 138.3 102 72.5
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.5e-31 138.3 98 72.4
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 4.6e-31 137.9 105 66.7
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 4.6e-31 137.9 103 68.9
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 4.6e-31 137.9 103 68.9
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 5.9e-31 137.5 105 67.6
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 67.6
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 5.9e-31 137.5 103 70.9
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 7.8e-31 137.1 104 68.3
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.8e-31 137.1 99 70.7
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.8e-31 137.1 99 70.7
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 7.8e-31 137.1 103 68.9
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.0e-30 136.7 107 69.2
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 1.3e-30 136.3 105 66.7
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.7e-30 136.0 105 68.6
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 1.7e-30 136.0 99 69.7
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 69.9
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.7e-30 136.0 103 71.8
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 2.3e-30 135.6 101 69.3
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 2.3e-30 135.6 97 74.2
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 6.6e-30 134.0 101 69.3
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 8.6e-30 133.7 97 70.1
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 8.6e-30 133.7 107 66.4
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 1.5e-29 132.9 97 71.1
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 2.5e-29 132.1 113 66.4
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.3e-29 131.7 105 66.7
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 4.3e-29 131.3 103 67.0
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.2e-28 129.8 105 63.8
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 2.8e-28 128.6 98 66.3
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 3.6e-28 128.3 102 65.7
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 8.0e-28 127.1 97 68.0
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 1.0e-27 126.7 97 69.1
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 3.1e-27 125.2 98 68.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 5.2e-27 124.4 102 63.7
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 6.8e-27 124.0 103 64.1
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 6.8e-27 124.0 103 64.1
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 7.5e-26 120.6 98 64.3
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 3.7e-25 118.2 153 50.3
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 5.4e-24 114.4 76 77.6
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 7.0e-24 114.0 82 74.4
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 7.0e-24 114.0 81 71.6
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 7.0e-24 114.0 84 70.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 9.2e-24 113.6 80 73.8
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 9.2e-24 113.6 80 76.2
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.3e-22 109.0 82 70.7
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 8.6e-22 107.1 80 71.2
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.5e-21 105.5 80 68.8
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 4.3e-21 104.8 101 56.4
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 9.5e-21 103.6 99 53.5
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 6.2e-20 100.9 79 68.4
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 6.2e-20 100.9 101 55.4
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 8.9e-19 97.1 80 63.8
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 2.0e-18 95.9 74 66.2
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 2.0e-18 95.9 78 64.1
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 4.4e-18 94.7 90 53.3
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 4.9e-17 91.3 77 66.2
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 4.1e-16 88.2 76 56.6
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 6.0e-15 84.3 94 46.8
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 2.3e-14 82.4 93 46.2
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.1e-11 73.6 54 74.1
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 4.4e-10 68.2 79 49.4
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 4.4e-10 68.2 79 49.4
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 1.4e-08 63.2 51 56.9
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 4.1e-08 61.6 80 40.0
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.0e-06 57.0 77 40.3
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 6.6e-06 54.3 94 34.0


User provided reference genes

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