Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1294300 Malus domestica HOM05D007792 ORTHO05D009931 2.7e-18 94.4 50 100.0
RcHm_v2.0_CPg0502001 Rosa chinensis HOM05D007792 ORTHO05D009931 5.3e-14 80.1 42 100.0
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 1.2e-13 79.0 44 93.2
Nn021s41529 Nelumbo nucifera HOM05D007792 ORTHO05D009931 1.2e-13 79.0 42 97.6
Nn6g32081 Nelumbo nucifera HOM05D007792 ORTHO05D009931 1.2e-13 79.0 42 97.6
Sed0001088 Sechium edule HOM05D007792 ORTHO05D009931 1.2e-13 79.0 44 93.2
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 1.2e-13 79.0 44 93.2
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 1.2e-13 79.0 44 93.2
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 1.5e-13 78.6 42 97.6
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 1.5e-13 78.6 42 97.6
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 1.5e-13 78.6 42 97.6
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 1.5e-13 78.6 42 97.6
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 1.5e-13 78.6 42 97.6
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 1.5e-13 78.6 42 97.6
Solyc00g180440.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.5e-13 78.6 42 97.6
PSO548G0123 Papaver somniferum HOM05D007792 ORTHO05D009931 2.6e-13 77.8 42 95.2
HanXRQChr01g0020291 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
HanXRQChr04g0094291 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
HanXRQChr04g0095111 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
HanXRQChr10g0283611 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
HanXRQChr10g0284301 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
HanXRQChr10g0318141 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
HanXRQChr11g0326891 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
HanXRQCPg0580101 Helianthus annuus HOM05D007792 ORTHO05D009931 3.4e-13 77.4 42 95.2
SalBow1G1024 Salvia bowleyana HOM05D007792 ORTHO05D009931 1.0e-12 75.9 42 90.5
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 1.3e-12 75.5 42 90.5
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 1.3e-12 75.5 42 90.5
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 1.3e-12 75.5 42 90.5
Sc09g0009720 Simmondsia chinensis HOM05D007792 ORTHO05D001488 1.3e-12 75.5 42 90.5
Glyma.12G232100 Glycine max HOM05D007792 ORTHO05D009931 2.2e-12 74.7 42 90.5
HanXRQChr02g0052571 Helianthus annuus HOM05D007792 ORTHO05D009931 2.9e-12 74.3 42 92.9
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 2.9e-12 74.3 42 92.9
BNapus_Darmor_BZH_scaffold_287p00200 Brassica napus HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
C02p43590 Brassica napus HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
C06p22950 Brassica napus HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
BolSC29t60477H Brassica oleracea HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
BolSC29t60598H Brassica oleracea HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
BolSC47t61086H Brassica oleracea HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
BraSC138t45565Z Brassica rapa HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
BraSC25t45855Z Brassica rapa HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
BraSC58t46432Z Brassica rapa HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 88.1
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 3.8e-12 73.9 42 92.9
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 5.0e-12 73.6 42 88.1
Solyc11g063720.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 5.0e-12 73.6 42 90.5
arahy.Tifrunner.gnm1.ann1.H056B9 Arachis hypogaea HOM05D007792 ORTHO05D009931 6.5e-12 73.2 42 88.1
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 6.5e-12 73.2 42 88.1
Solyc11g063440.3 Solanum lycopersicum HOM05D007792 ORTHO05D009931 6.5e-12 73.2 42 90.5
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 8.5e-12 72.8 42 90.5
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 8.5e-12 72.8 42 90.5
Lalb_Chr07g0192061 Lupinus albus HOM05D007792 ORTHO05D009931 2.5e-11 71.2 42 85.7
Lalb_Chr08g0237911 Lupinus albus HOM05D007792 ORTHO05D009931 2.5e-11 71.2 42 85.7
Lalb_Chr23g0274331 Lupinus albus HOM05D007792 ORTHO05D009931 2.5e-11 71.2 42 85.7
Sc22g0003450 Simmondsia chinensis HOM05D002194 ORTHO05D002840 2.5e-11 71.2 42 85.7
C04p42970 Brassica napus HOM05D007792 ORTHO05D009931 3.2e-11 70.9 42 85.7
BolC6t36199H Brassica oleracea HOM05D007792 ORTHO05D009931 3.2e-11 70.9 42 83.3
BolC8t52434H Brassica oleracea HOM05D007792 ORTHO05D009931 3.2e-11 70.9 42 85.7
Solyc11g063660.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 4.2e-11 70.5 42 85.7
CARHR287410 Cardamine hirsuta HOM05D007792 ORTHO05D009931 1.2e-10 68.9 42 85.7
Gohir.A10G134900 Gossypium hirsutum HOM05D007792 ORTHO05D009931 2.1e-10 68.2 42 83.3
arahy.Tifrunner.gnm1.ann1.81C611 Arachis hypogaea HOM05D007792 ORTHO05D009931 2.7e-10 67.8 42 81.0
BraSC58t46493Z Brassica rapa HOM05D007792 ORTHO05D009931 6.1e-10 66.6 44 81.8
Sed0005117 Sechium edule HOM05D007792 ORTHO05D009931 7.9e-10 66.2 44 79.5
Aqoxy2G00943 Aquilegia oxysepala HOM05D007792 ORTHO05D009931 1.8e-09 65.1 42 81.0
BolC2t08921H Brassica oleracea HOM05D007792 ORTHO05D009931 5.1e-09 63.5 42 78.6
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 6.7e-09 63.2 36 88.9
Medtr4g034720 Medicago truncatula HOM05D007792 ORTHO05D009931 1.1e-08 62.4 42 73.8
Medtr7g085940 Medicago truncatula HOM05D007792 ORTHO05D009931 1.1e-08 62.4 42 73.8
Gohir.A02G053101 Gossypium hirsutum HOM05D007792 ORTHO05D009931 9.7e-08 59.3 38 78.9


User provided reference genes

Program Settings