Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 2.7e-132 475.3 241 100.0
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 1.2e-106 390.2 217 92.6
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 2.7e-95 352.4 229 83.0
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 8.1e-92 340.9 226 80.5
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 9.5e-85 317.4 225 75.1
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 2.1e-84 316.2 231 73.6
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.9e-81 305.8 245 69.0
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.4e-80 303.5 233 70.4
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 2.1e-76 289.7 216 70.4
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 2.6e-74 282.7 219 69.9
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 3.4e-74 282.3 216 70.8
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 1.3e-73 280.4 220 69.5
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 2.2e-73 279.6 220 72.3
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 2.9e-73 279.3 229 67.7
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 8.4e-73 277.7 220 69.1
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 1.1e-72 277.3 217 68.7
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.4e-72 276.9 230 68.7
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.9e-72 276.6 226 68.6
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 3.2e-72 275.8 219 68.9
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 7.1e-72 274.6 219 70.3
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.2e-71 273.9 216 70.4
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 2.1e-71 273.1 217 68.7
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.1e-71 273.1 216 69.0
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 2.7e-71 272.7 216 69.4
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 4.6e-71 271.9 218 70.2
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 1.0e-70 270.8 230 63.9
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.0e-70 270.8 216 67.6
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 1.3e-70 270.4 218 70.6
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.7e-70 270.0 225 66.7
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.7e-70 270.0 225 67.1
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 3.0e-70 269.2 181 78.5
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 3.0e-70 269.2 234 63.7
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 3.9e-70 268.9 227 65.6
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 6.6e-70 268.1 218 71.6
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 9.6e-69 264.2 189 73.5
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 2.8e-68 262.7 223 66.4
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 2.8e-68 262.7 173 79.2
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.8e-68 261.9 217 66.4
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 6.2e-68 261.5 217 65.9
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.1e-67 260.8 224 65.6
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.4e-67 260.4 230 65.2
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.4e-67 260.4 230 65.2
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 1.8e-67 260.0 217 67.7
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 3.1e-67 259.2 221 66.1
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 5.3e-67 258.5 176 74.4
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 5.3e-67 258.5 188 71.8
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 1.2e-66 257.3 176 73.9
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 2.0e-66 256.5 232 65.9
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 2.0e-66 256.5 216 64.4
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 9.9e-66 254.2 231 61.9
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.3e-65 253.8 222 64.9
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.7e-65 253.4 150 84.0
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.8e-65 252.3 220 63.2
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 3.8e-65 252.3 232 61.6
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 4.9e-65 251.9 224 64.7
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 8.4e-65 251.1 167 77.8
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.1e-64 250.8 176 73.9
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.4e-64 250.4 167 77.8
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 1.9e-64 250.0 213 66.2
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.9e-64 250.0 214 66.4
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 7.1e-64 248.1 182 72.5
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 7.1e-64 248.1 219 62.1
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 9.3e-64 247.7 234 60.7
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 9.3e-64 247.7 190 70.0
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 9.3e-64 247.7 200 66.5
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.2e-63 247.3 145 82.8
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.2e-63 247.3 231 59.3
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 1.6e-63 246.9 173 75.7
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.1e-63 246.5 182 71.4
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.7e-63 246.1 163 76.7
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 2.7e-63 246.1 186 69.9
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 2.7e-63 246.1 201 66.7
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 2.7e-63 246.1 143 84.6
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 4.6e-63 245.4 231 60.6
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 6.0e-63 245.0 238 59.2
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 5.1e-62 241.9 202 65.3
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 6.6e-62 241.5 148 78.4
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.1e-61 240.7 212 62.7
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 1.1e-61 240.7 250 54.4
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 4.3e-61 238.8 130 89.2
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 4.3e-61 238.8 160 76.9
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 7.4e-61 238.0 130 90.0
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 9.6e-61 237.7 172 72.1
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 9.6e-61 237.7 172 72.1
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.1e-60 236.5 175 70.9
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 2.1e-60 236.5 166 73.5
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.1e-60 236.5 175 70.9
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.1e-60 236.5 128 89.8
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 3.6e-60 235.7 148 80.4
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 4.8e-60 235.3 143 80.4
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 1.4e-59 233.8 179 69.8
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 1.5e-58 230.3 149 77.2
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 1.8e-54 216.9 154 70.1
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.4e-51 207.2 190 58.4
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 9.3e-48 194.5 134 69.4
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 2.1e-44 183.3 218 54.6
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 1.2e-42 177.6 89 94.4
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.6e-42 176.4 164 61.0
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.1e-40 171.0 89 88.8
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 4.2e-40 169.1 176 55.7
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 2.1e-39 166.8 130 60.8
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 8.7e-38 161.4 143 54.5
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.4e-34 149.4 164 53.0
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 7.7e-34 148.3 145 55.2
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 2.5e-32 143.3 129 64.3
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 4.2e-32 142.5 118 64.4
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 5.5e-32 142.1 247 41.3
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 7.2e-32 141.7 141 54.6
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.1e-29 134.4 93 75.3
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 3.7e-28 129.4 66 92.4
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 6.9e-27 125.2 109 64.2
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.0e-21 107.1 70 75.7
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.6e-21 106.7 56 92.9


User provided reference genes

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