Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 3.1e-107 391.7 190 100.0
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 2.3e-81 305.8 183 86.3
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 3.6e-55 218.8 185 65.9
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 1.8e-33 146.7 183 52.5
FAN16G3477 Fragaria x ananassa HOM05D015893 ORTHO05D019166 2.1e-31 139.8 185 49.2
FvH4_3g16930 Fragaria vesca HOM05D015893 ORTHO05D019166 6.3e-31 138.3 185 48.6
FAN11G0710 Fragaria x ananassa HOM05D015893 ORTHO05D019166 6.3e-31 138.3 185 48.6
FAN21G1907 Fragaria x ananassa HOM05D015893 ORTHO05D019166 1.3e-25 120.6 185 45.4
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.2e-13 80.9 181 33.7
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 1.2e-13 80.9 188 36.2
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.5e-13 80.5 191 36.1
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 2.9e-12 76.3 181 36.5
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 1.4e-11 73.9 186 33.3
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 1.9e-11 73.6 181 35.4
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 2.5e-11 73.2 186 33.9
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 2.5e-11 73.2 170 35.9
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.2e-10 70.9 152 34.2
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.6e-10 70.5 184 32.6
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 2.7e-10 69.7 173 37.0
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 3.6e-10 69.3 185 30.8
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 4.7e-10 68.9 160 36.2
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 4.7e-10 68.9 187 31.0
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 1.0e-09 67.8 191 30.9
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 1.4e-09 67.4 161 36.0
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.4e-09 67.4 161 36.0
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 1.8e-09 67.0 196 29.6
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 3.9e-09 65.9 142 35.9
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 3.9e-09 65.9 183 31.1
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 5.1e-09 65.5 161 35.4
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.5e-08 63.9 185 31.9
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.5e-08 63.9 196 31.6
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.6e-08 63.2 194 34.0
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 4.4e-08 62.4 164 34.8
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 5.7e-08 62.0 154 35.1
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 9.7e-08 61.2 180 31.7
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 9.7e-08 61.2 198 30.3
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 9.7e-08 61.2 198 28.3
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.7e-07 60.5 142 35.2
Potri.001G379300 Populus trichocarpa HOM05D015893 ORTHO05D009674 4.8e-07 58.9 181 31.5
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 6.3e-07 58.5 120 34.2
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 1.1e-06 57.8 183 34.4
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 4.1e-06 55.8 175 29.7
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 5.3e-06 55.5 167 31.7
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 5.3e-06 55.5 151 33.1
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 9.1e-06 54.7 190 29.5
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 9.1e-06 54.7 181 30.4


User provided reference genes

Program Settings