Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1271500 Malus domestica HOM05D000590 ORTHO05D006658 2.7e-99 365.2 164 100.0
MD03G1251300 Malus domestica HOM05D000590 ORTHO05D006658 1.5e-36 156.8 160 50.6
Prupe.4G155300 Prunus persica HOM05D000590 ORTHO05D006658 7.5e-33 144.4 160 46.2
FAN21G3792 Fragaria x ananassa HOM05D000590 ORTHO05D006658 1.3e-32 143.7 161 46.0
FAN25G1530 Fragaria x ananassa HOM05D000590 ORTHO05D006658 1.3e-32 143.7 160 46.9
RcHm_v2.0_Chr5g0029281 Rosa chinensis HOM05D000590 ORTHO05D006658 1.7e-32 143.3 160 46.2
FAN11G1469 Fragaria x ananassa HOM05D000590 ORTHO05D006658 3.7e-32 142.1 161 46.0
FAN16G1913 Fragaria x ananassa HOM05D000590 ORTHO05D006658 1.1e-31 140.6 161 45.3
Cpa.g.sc1162.1 Carica papaya HOM05D000590 ORTHO05D006658 9.2e-31 137.5 171 40.9
RcHm_v2.0_Chr5g0029121 Rosa chinensis HOM05D000590 ORTHO05D006658 9.2e-31 137.5 154 44.8
Manes.03G078000 Manihot esculenta HOM05D000590 ORTHO05D006658 3.5e-30 135.6 152 44.7
CANSAT56G2009 Cannabis sativa HOM05D000590 ORTHO05D006658 1.0e-29 134.0 159 42.1
Haze_08447 Corylus avellana HOM05D000590 ORTHO05D006658 1.3e-29 133.7 162 42.0
Gohir.D05G337300 Gossypium hirsutum HOM05D000590 ORTHO05D006658 1.3e-29 133.7 158 43.7
Gorai.009G361500 Gossypium raimondii HOM05D000590 ORTHO05D006658 1.3e-29 133.7 158 43.7
AUR62019672 Chenopodium quinoa HOM05D000590 ORTHO05D006658 1.7e-29 133.3 157 42.7
Gohir.A04G045500 Gossypium hirsutum HOM05D000590 ORTHO05D006658 5.0e-29 131.7 158 43.0
Potri.001G382500 Populus trichocarpa HOM05D000590 ORTHO05D006658 8.6e-29 131.0 166 40.4
AUR62013940 Chenopodium quinoa HOM05D000590 ORTHO05D006658 1.1e-28 130.6 157 42.0
Hund10399 Selenicereus undatus HOM05D000590 ORTHO05D006658 1.1e-28 130.6 154 41.6
Sed0014657 Sechium edule HOM05D000590 ORTHO05D006658 1.5e-28 130.2 174 38.5
Lsat_1_v5_gn_7_100300 Lactuca sativa HOM05D000590 ORTHO05D006658 1.9e-28 129.8 156 42.3
Dinv26700 Davidia involucrata HOM05D000943 ORTHO05D006658 2.5e-28 129.4 164 40.9
TAR627G0624 Trochodendron aralioides HOM05D000590 ORTHO05D006658 3.3e-28 129.0 173 39.3
BraA05t22287Z Brassica rapa HOM05D000590 ORTHO05D006658 4.3e-28 128.6 160 40.6
PGR031G2043 Punica granatum HOM05D000590 ORTHO05D006658 4.3e-28 128.6 159 40.9
A05p34710 Brassica napus HOM05D000590 ORTHO05D006658 7.3e-28 127.9 162 40.1
C05p52510 Brassica napus HOM05D000590 ORTHO05D006658 7.3e-28 127.9 160 40.0
Duzib213G0379 Durio zibethinus HOM05D000590 ORTHO05D006658 7.3e-28 127.9 162 41.4
Sp3g12970 Schrenkiella parvula HOM05D000590 ORTHO05D006658 7.3e-28 127.9 160 40.0
QL08p025144 Quercus lobata HOM05D000590 ORTHO05D006658 9.5e-28 127.5 162 40.7
Rhsim06G0212500 Rhododendron simsii HOM05D001914 ORTHO05D001983 9.5e-28 127.5 165 40.6
vmacro11976 Vaccinium macrocarpon HOM05D000590 ORTHO05D006658 9.5e-28 127.5 163 39.9
CiPaw.11G155300 Carya illinoinensis HOM05D000590 ORTHO05D006658 1.2e-27 127.1 161 40.4
COL.COLO4_17463 Corchorus olitorius HOM05D000590 ORTHO05D006658 1.2e-27 127.1 162 40.7
Dinv13353 Davidia involucrata HOM05D000590 ORTHO05D006658 1.2e-27 127.1 161 39.8
BcaB06g25360 Brassica carinata HOM05D000590 ORTHO05D006658 2.1e-27 126.3 157 39.5
AT3G14740 Arabidopsis thaliana HOM05D000590 ORTHO05D006658 2.8e-27 125.9 157 40.1
BcaC05g29040 Brassica carinata HOM05D000590 ORTHO05D006658 2.8e-27 125.9 160 39.4
BolC5t33934H Brassica oleracea HOM05D000590 ORTHO05D006658 2.8e-27 125.9 160 39.4
Eucgr.F03226 Eucalyptus grandis HOM05D000590 ORTHO05D006658 2.8e-27 125.9 160 38.8
FvH4_3g17540 Fragaria vesca HOM05D000590 ORTHO05D006658 3.6e-27 125.6 79 70.9
THA.LOC104815580 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 3.6e-27 125.6 160 40.0
Potri.011G103100 Populus trichocarpa HOM05D000590 ORTHO05D006658 4.7e-27 125.2 165 40.6
Thhalv10021064m.g Eutrema salsugineum HOM05D000590 ORTHO05D006658 6.2e-27 124.8 160 38.8
Sc07g0002360 Simmondsia chinensis HOM05D000590 ORTHO05D006658 6.2e-27 124.8 147 44.9
Oeu005375.1 Olea europaea HOM05D000590 ORTHO05D006658 8.1e-27 124.4 159 38.4
Thecc.07G135100 Theobroma cacao HOM05D000590 ORTHO05D006658 8.1e-27 124.4 162 39.5
Lalb_Chr01g0006941 Lupinus albus HOM05D000590 ORTHO05D006658 1.1e-26 124.0 157 40.8
Sabra11G0077600 Salix brachista HOM05D000590 ORTHO05D006658 1.1e-26 124.0 162 38.9
Carub.0003s1441 Capsella rubella HOM05D000590 ORTHO05D006658 1.4e-26 123.6 157 39.5
TWI38G1174 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 1.8e-26 123.2 165 41.2
Nn6g34385 Nelumbo nucifera HOM05D000590 ORTHO05D006658 2.3e-26 122.9 162 38.9
Sabra11G0082500 Salix brachista HOM05D000590 ORTHO05D006658 2.3e-26 122.9 161 38.5
AL3G27050 Arabidopsis lyrata HOM05D000590 ORTHO05D006658 4.0e-26 122.1 157 38.2
arahy.Tifrunner.gnm1.ann1.14DVUV Arachis hypogaea HOM05D000590 ORTHO05D006658 4.0e-26 122.1 164 39.6
Atru.chr2.1901 Acer truncatum HOM05D000590 ORTHO05D006658 5.2e-26 121.7 157 40.8
arahy.Tifrunner.gnm1.ann1.4S3ZRX Arachis hypogaea HOM05D000590 ORTHO05D006658 5.2e-26 121.7 163 39.9
ECA236G0454 Erigeron canadensis HOM05D000590 ORTHO05D006658 5.2e-26 121.7 157 39.5
Sabra16G0251900 Salix brachista HOM05D000590 ORTHO05D006658 5.2e-26 121.7 159 39.6
Aqoxy6G01959 Aquilegia oxysepala HOM05D000590 ORTHO05D006658 6.8e-26 121.3 123 48.0
CAN.G375.56 Capsicum annuum HOM05D000590 ORTHO05D006658 6.8e-26 121.3 153 38.6
CARHR089680 Cardamine hirsuta HOM05D000590 ORTHO05D006658 8.9e-26 120.9 160 38.1
Nitab4.5_0003618g0030 Nicotiana tabacum HOM05D001914 ORTHO05D001983 2.0e-25 119.8 155 38.7
RcHm_v2.0_Chr5g0029161 Rosa chinensis HOM05D000590 ORTHO05D006658 2.6e-25 119.4 76 68.4
Aa31LG8G1960 Aethionema arabicum HOM05D000590 ORTHO05D006658 5.8e-25 118.2 160 36.2
TWI39G0773 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 5.8e-25 118.2 165 40.0
HanXRQChr11g0330421 Helianthus annuus HOM05D000590 ORTHO05D006658 7.5e-25 117.9 158 39.9
MSTRG.6694 Avicennia marina HOM05D000590 ORTHO05D006658 1.3e-24 117.1 170 36.5
TPR.G16489 Trifolium pratense HOM05D000590 ORTHO05D006658 1.3e-24 117.1 152 38.8
PGSC0003DMG400007086 Solanum tuberosum HOM05D000590 ORTHO05D006658 1.7e-24 116.7 161 37.3
unitig_699.g19239 Utricularia gibba HOM05D000590 ORTHO05D006658 1.7e-24 116.7 159 35.8
DCAR_019620 Daucus carota HOM05D000590 ORTHO05D006658 2.9e-24 115.9 166 36.7
Medtr8g042510 Medicago truncatula HOM05D000590 ORTHO05D006658 3.7e-24 115.5 155 38.1
GSVIVG01014083001 Vitis vinifera HOM05D000590 ORTHO05D006658 3.7e-24 115.5 72 68.1
Actinidia12609 Actinidia chinensis HOM05D000590 ORTHO05D006658 4.9e-24 115.2 176 34.7
BcaC09g48444 Brassica carinata HOM05D000590 ORTHO05D006658 6.4e-24 114.8 157 36.3
C01p49700 Brassica napus HOM05D000590 ORTHO05D006658 6.4e-24 114.8 157 36.3
BolC1t04926H Brassica oleracea HOM05D000590 ORTHO05D006658 6.4e-24 114.8 157 36.3
ClCG11G017110 Citrullus lanatus HOM05D000590 ORTHO05D006658 8.3e-24 114.4 79 59.5
Cc05_g10610 Coffea canephora HOM05D000590 ORTHO05D006658 8.3e-24 114.4 166 35.5
Solyc07g062100.4 Solanum lycopersicum HOM05D000590 ORTHO05D006658 1.1e-23 114.0 161 36.6
MELO3C025676.2 Cucumis melo HOM05D000590 ORTHO05D006658 1.4e-23 113.6 79 59.5
THA.LOC104822584 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 1.4e-23 113.6 154 39.0
Ah.06g187630 Amaranthus hybridus HOM05D000590 ORTHO05D006658 2.4e-23 112.8 72 63.9
Phvul.011G170000 Phaseolus vulgaris HOM05D000590 ORTHO05D006658 3.2e-23 112.5 156 37.8
Aqoxy1G01876 Aquilegia oxysepala HOM05D000590 ORTHO05D006658 4.1e-23 112.1 159 38.4
VMungo1127G1365 Vigna mungo HOM05D000590 ORTHO05D006658 4.1e-23 112.1 156 37.8
Sopen07g030360 Solanum pennellii HOM05D000590 ORTHO05D006658 5.4e-23 111.7 161 36.0
TAR627G0119 Trochodendron aralioides HOM05D000590 ORTHO05D006658 5.4e-23 111.7 95 51.6
Peaxi162Scf00111g10126 Petunia axillaris HOM05D001914 ORTHO05D001983 7.1e-23 111.3 155 36.8
CsaV3_4G032770 Cucumis sativus L. HOM05D000590 ORTHO05D006658 9.2e-23 110.9 79 58.2
Lj3g0026308 Lotus japonicus HOM05D000590 ORTHO05D006658 9.2e-23 110.9 154 37.7
Migut.H02030 Erythranthe guttata HOM05D000590 ORTHO05D006658 1.6e-22 110.2 148 37.2
Glyma.15G210600 Glycine max HOM05D000590 ORTHO05D006658 2.7e-22 109.4 167 36.5
Glyma.15G211600 Glycine max HOM05D000590 ORTHO05D006658 2.7e-22 109.4 167 36.5
PSO541G5312 Papaver somniferum HOM05D000590 ORTHO05D006658 2.7e-22 109.4 163 36.2
PSO675G2935 Papaver somniferum HOM05D000590 ORTHO05D006658 2.7e-22 109.4 163 36.2
Nitab4.5_0001140g0100 Nicotiana tabacum HOM05D001914 ORTHO05D001983 6.0e-22 108.2 67 65.7
CDE02G4695 Ceratophyllum demersum HOM05D000590 ORTHO05D006658 7.8e-22 107.8 153 37.3
Ciclev10021099m.g Citrus clementina HOM05D000590 ORTHO05D006658 2.3e-21 106.3 101 46.5
EL10Ac4g08438 Beta vulgaris HOM05D000590 ORTHO05D006658 3.0e-21 105.9 72 58.3
SGA_v2.0_scaffold130G34256 Striga asiatica HOM05D000590 ORTHO05D006658 3.0e-21 105.9 161 32.9
A01p39070 Brassica napus HOM05D000590 ORTHO05D006658 2.5e-20 102.8 87 47.1
BraA01t03954Z Brassica rapa HOM05D000590 ORTHO05D006658 2.5e-20 102.8 87 47.1
Psat4g138760 Pisum sativum HOM05D000590 ORTHO05D006658 2.5e-20 102.8 87 49.4
Lj8P145T49 Lonicera japonica HOM05D000590 ORTHO05D006658 3.3e-20 102.4 95 49.5
CDE06G1605 Ceratophyllum demersum HOM05D000590 ORTHO05D006658 9.5e-20 100.9 147 37.4
Zm00001eb122030 Zea mays HOM05D000590 ORTHO05D006658 4.7e-19 98.6 155 34.8
MBI02_g37325_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006658 6.2e-19 98.2 80 53.8
Ah.11g049160 Amaranthus hybridus HOM05D000590 ORTHO05D006658 4.0e-18 95.5 61 62.3
SEGI_07265 Sequoiadendron giganteum HOM05D000590 ORTHO05D006658 6.4e-16 88.2 153 33.3
Pp3c15_18060 Physcomitrium patens HOM05D000590 ORTHO05D006658 2.4e-15 86.3 156 31.4
CiPaw.12G109900 Carya illinoinensis HOM05D000590 ORTHO05D006658 9.2e-15 84.3 134 35.1
ATR0051G042 Amborella trichopoda HOM05D000590 ORTHO05D006658 1.7e-13 80.1 68 48.5
HPP92_021749 Vanilla planifolia HOM05D000590 ORTHO05D006658 3.0e-13 79.3 69 50.7
AagrBONN_evm.TU.Sc2ySwM_344.1598 Anthoceros agrestis HOM05D000590 ORTHO05D006658 9.6e-12 74.3 152 28.3
Pp3c9_22160 Physcomitrium patens HOM05D000590 ORTHO05D006658 9.0e-10 67.8 72 41.7
Ca_12744_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006658 9.9e-09 64.3 121 33.1
PRCOL_00005644 Prasinoderma coloniale HOM05D000590 ORTHO05D006658 1.2e-06 57.4 60 41.7
Cfa024843 Carpinus fangiana HOM05D003597 ORTHO05D006658 4.6e-06 55.5 152 25.7
FvH4_3g17570 Fragaria vesca HOM05D000590 ORTHO05D006658 6.0e-06 55.1 35 68.6


User provided reference genes

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