Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 3.5e-61 238.0 115 100.0
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 5.3e-41 171.0 90 90.0
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 9.0e-41 170.2 90 87.8
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.5e-35 152.1 90 77.8
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.5e-35 152.1 90 77.8
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 7.4e-35 150.6 90 76.7
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 1.6e-34 149.4 91 75.8
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 4.8e-34 147.9 90 75.6
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 4.8e-34 147.9 91 76.9
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 8.1e-34 147.1 90 74.4
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.8e-33 146.0 88 72.7
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 1.8e-33 146.0 90 72.2
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 9.0e-33 143.7 91 73.6
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.2e-32 143.3 90 71.1
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.6e-32 142.1 90 72.2
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 2.6e-32 142.1 91 72.5
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.6e-32 142.1 90 72.2
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 2.6e-32 142.1 88 71.6
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 3.4e-32 141.7 91 75.8
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 5.8e-32 141.0 90 68.9
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 5.8e-32 141.0 88 70.5
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 5.8e-32 141.0 90 68.9
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 5.8e-32 141.0 90 70.0
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 7.6e-32 140.6 91 71.4
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.6e-32 140.6 91 71.4
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.6e-32 140.6 91 71.4
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.0e-31 140.2 91 70.3
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 1.3e-31 139.8 91 70.3
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 1.7e-31 139.4 88 72.7
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.2e-31 139.0 90 70.0
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 2.9e-31 138.7 90 67.8
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 2.9e-31 138.7 90 68.9
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.8e-31 138.3 91 70.3
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.8e-31 138.3 91 70.3
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 3.8e-31 138.3 91 70.3
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 4.9e-31 137.9 90 67.8
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 6.5e-31 137.5 90 68.9
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 8.4e-31 137.1 87 70.1
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 1.1e-30 136.7 90 66.7
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.4e-30 136.3 90 68.9
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.4e-30 136.3 90 68.9
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 1.9e-30 136.0 90 68.9
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 2.5e-30 135.6 90 68.9
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 3.2e-30 135.2 90 67.8
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 3.2e-30 135.2 90 67.8
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 3.2e-30 135.2 91 69.2
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 3.2e-30 135.2 90 67.8
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 3.2e-30 135.2 90 67.8
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.2e-30 134.8 90 73.3
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 4.2e-30 134.8 90 68.9
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 5.5e-30 134.4 90 66.7
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 5.5e-30 134.4 90 66.7
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 5.5e-30 134.4 87 69.0
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 5.5e-30 134.4 87 69.0
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 7.1e-30 134.0 90 66.7
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 7.1e-30 134.0 90 66.7
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 7.1e-30 134.0 88 69.3
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.2e-29 133.3 90 71.1
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.2e-29 133.3 90 66.7
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.2e-29 133.3 90 67.8
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.6e-29 132.9 88 70.5
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.1e-29 132.5 90 65.6
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 2.1e-29 132.5 90 66.7
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 2.7e-29 132.1 101 64.4
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 3.5e-29 131.7 90 66.7
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 6.0e-29 131.0 90 65.6
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 7.9e-29 130.6 90 65.6
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.3e-28 129.8 91 67.0
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 1.3e-28 129.8 88 67.0
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.8e-28 129.4 90 62.2
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 2.3e-28 129.0 90 61.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 8.7e-28 127.1 90 64.4
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 1.1e-27 126.7 86 67.4
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.1e-27 126.7 90 63.3
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 1.1e-27 126.7 90 61.1
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.1e-27 126.7 87 63.2
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.5e-27 126.3 91 67.0
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 1.5e-27 126.3 90 61.1
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 1.5e-27 126.3 87 63.2
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.9e-27 125.9 90 60.0
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 1.9e-27 125.9 90 63.3
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.9e-27 125.9 90 62.2
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 3.3e-27 125.2 91 65.9
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 3.3e-27 125.2 91 65.9
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 4.3e-27 124.8 90 63.3
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 4.3e-27 124.8 91 65.9
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 9.6e-27 123.6 91 64.8
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.3e-26 123.2 91 64.8
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.3e-26 123.2 91 64.8
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 1.6e-26 122.9 91 59.3
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 2.1e-26 122.5 91 64.8
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.1e-25 120.2 91 62.6
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 1.1e-25 120.2 91 62.6
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.1e-25 120.2 91 62.6
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.1e-25 120.2 91 62.6
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 1.1e-25 120.2 91 62.6
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 3.1e-25 118.6 91 57.1
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.0e-24 115.9 91 58.2
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 5.5e-22 107.8 91 53.8
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 8.7e-20 100.5 90 54.4
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 1.0e-07 60.5 90 37.8
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 5.0e-07 58.2 75 42.7
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.9e-06 56.2 82 39.0
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.5e-06 54.7 82 39.0


User provided reference genes

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