Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 3.2e-101 371.7 181 100.0
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 1.0e-91 340.1 179 89.4
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 1.8e-88 329.3 181 86.7
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 5.3e-88 327.8 181 85.6
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 9.0e-88 327.0 181 86.7
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 9.0e-88 327.0 181 86.7
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 1.5e-87 326.2 181 84.5
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 2.6e-87 325.5 181 86.2
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 3.4e-87 325.1 181 85.1
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 1.3e-86 323.2 180 84.4
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 1.7e-86 322.8 181 83.4
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 8.5e-86 320.5 181 84.0
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 1.9e-85 319.3 181 81.8
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 4.2e-85 318.2 181 83.4
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 5.5e-85 317.8 181 82.3
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 5.5e-85 317.8 181 83.4
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 9.4e-85 317.0 181 83.4
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 1.2e-84 316.6 181 82.9
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 1.6e-84 316.2 181 82.3
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 2.1e-84 315.8 181 81.8
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 2.7e-84 315.5 181 81.8
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 2.7e-84 315.5 181 81.8
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 2.7e-84 315.5 181 81.8
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 4.6e-84 314.7 181 83.4
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 7.9e-84 313.9 200 77.0
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 1.0e-83 313.5 181 81.2
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 1.0e-83 313.5 181 81.2
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 1.0e-83 313.5 181 80.1
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 1.4e-83 313.2 181 80.7
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 1.4e-83 313.2 181 81.8
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 1.4e-83 313.2 181 81.8
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 1.8e-83 312.8 181 80.7
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 1.8e-83 312.8 181 81.2
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 1.8e-83 312.8 181 79.0
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 2.3e-83 312.4 181 79.0
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 2.3e-83 312.4 181 81.2
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 2.3e-83 312.4 181 81.2
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 2.3e-83 312.4 181 81.2
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.3e-83 312.4 181 81.2
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.3e-83 312.4 181 81.8
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 3.0e-83 312.0 181 81.8
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 3.9e-83 311.6 181 80.7
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 3.9e-83 311.6 181 81.2
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 5.1e-83 311.2 181 79.6
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 6.7e-83 310.8 181 81.2
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 8.8e-83 310.5 181 80.7
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 1.5e-82 309.7 181 80.1
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 2.0e-82 309.3 181 79.6
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 2.5e-82 308.9 181 79.6
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 2.5e-82 308.9 181 79.0
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 4.3e-82 308.1 181 79.6
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 5.7e-82 307.8 181 79.0
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 5.7e-82 307.8 181 79.0
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 9.7e-82 307.0 181 79.6
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 9.7e-82 307.0 181 79.0
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 9.7e-82 307.0 181 78.5
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 9.7e-82 307.0 179 80.4
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 1.7e-81 306.2 181 79.6
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 1.7e-81 306.2 181 79.0
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 2.2e-81 305.8 181 79.0
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 2.2e-81 305.8 181 79.6
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 2.2e-81 305.8 181 78.5
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 4.8e-81 304.7 181 79.6
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 1.1e-80 303.5 179 78.8
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 4.1e-80 301.6 182 79.1
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 6.9e-80 300.8 179 76.5
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 6.9e-80 300.8 181 76.2
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 5.9e-79 297.7 181 75.7
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 1.7e-78 296.2 181 76.8
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 7.2e-77 290.8 179 75.4
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 2.1e-76 289.3 207 68.6
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 6.1e-76 287.7 188 71.8
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 6.1e-76 287.7 181 75.1
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 5.1e-75 284.6 204 67.6
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 1.1e-74 283.5 166 79.5
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 2.2e-73 279.3 161 82.0
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 2.8e-73 278.9 179 73.7
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 2.4e-72 275.8 175 74.9
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 7.0e-72 274.2 162 78.4
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 9.1e-72 273.9 176 73.9
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 9.1e-72 273.9 160 79.4
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 1.5e-71 273.1 160 81.2
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 5.9e-71 271.2 178 70.2
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 2.2e-70 269.2 161 77.0
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 6.5e-70 267.7 161 78.3
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 1.4e-69 266.5 176 68.2
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 2.1e-68 262.7 163 73.6
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 3.6e-68 261.9 157 76.4
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 3.9e-67 258.5 181 68.5
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 5.2e-67 258.1 176 67.0
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 1.1e-66 256.9 173 73.4
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 2.6e-66 255.8 168 72.0
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 2.2e-65 252.7 165 72.7
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 2.4e-64 249.2 219 61.6
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 5.3e-64 248.1 176 64.8
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 5.9e-63 244.6 154 75.3
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 5.9e-63 244.6 140 80.7
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 3.2e-61 238.8 140 78.6
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 2.0e-58 229.6 172 59.9
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 6.3e-57 224.6 182 63.7
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 6.1e-52 208.0 115 82.6
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 1.4e-48 196.8 175 51.4
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 1.2e-47 193.7 122 73.0
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 4.5e-47 191.8 118 73.7
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 1.9e-45 186.4 131 67.2
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 1.0e-43 180.6 189 54.5
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 1.0e-43 180.6 189 54.5
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 2.9e-38 162.5 174 43.1
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 5.6e-37 158.3 145 60.0
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 9.5e-37 157.5 174 43.1
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 4.7e-36 155.2 95 71.6
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 4.0e-35 152.1 91 74.7
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 4.4e-34 148.7 97 71.1
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 1.1e-32 144.1 117 61.5
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 9.5e-29 131.0 178 42.7
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 8.3e-25 117.9 78 66.7
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 7.8e-23 111.3 72 68.1
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 1.3e-22 110.5 100 58.0
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 2.3e-19 99.8 101 56.4
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 5.2e-19 98.6 65 70.8
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 1.5e-18 97.1 56 78.6
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 4.4e-18 95.5 56 82.1
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 3.9e-14 82.4 52 73.1
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 6.6e-14 81.6 47 83.0


User provided reference genes

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