Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 3.8e-157 558.1 283 100.0
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 1.1e-116 423.7 249 90.8
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 2.1e-115 419.5 249 90.0
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 4.8e-104 381.7 249 81.9
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 6.3e-104 381.3 249 81.9
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 2.4e-95 352.8 250 75.6
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 7.7e-94 347.8 250 74.8
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 1.7e-93 346.7 250 74.0
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 4.2e-92 342.0 250 72.8
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 3.6e-91 339.0 249 72.3
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 5.2e-90 335.1 250 72.4
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 1.5e-89 333.6 250 70.4
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 1.5e-89 333.6 250 70.0
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 2.6e-89 332.8 250 70.8
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 5.7e-89 331.6 272 66.9
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 5.7e-89 331.6 250 71.2
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.3e-88 330.5 250 70.8
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 1.7e-88 330.1 250 70.0
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 2.2e-88 329.7 250 70.4
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 2.8e-88 329.3 250 70.4
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 4.9e-88 328.6 250 70.4
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 6.3e-88 328.2 250 70.4
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 2.4e-87 326.2 250 69.6
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 2.4e-87 326.2 250 70.0
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 9.2e-87 324.3 250 68.8
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 1.2e-86 323.9 250 69.6
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 1.2e-86 323.9 250 68.4
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.6e-86 323.6 250 70.0
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 2.7e-86 322.8 249 67.9
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 1.0e-85 320.9 250 68.0
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 1.0e-85 320.9 250 66.8
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 1.7e-85 320.1 250 68.4
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 1.7e-85 320.1 250 67.6
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 2.9e-85 319.3 249 67.5
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 5.0e-85 318.5 250 67.6
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 1.1e-84 317.4 249 66.7
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.5e-84 317.0 250 66.8
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 4.3e-84 315.5 250 65.2
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 1.2e-83 313.9 250 66.8
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 1.6e-83 313.5 250 67.2
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 2.1e-83 313.2 250 67.6
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 2.1e-83 313.2 250 66.0
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 2.8e-83 312.8 250 66.4
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 1.4e-82 310.5 258 63.6
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 1.4e-82 310.5 250 66.8
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 3.0e-82 309.3 250 66.0
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 5.2e-82 308.5 250 64.8
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 6.8e-82 308.1 250 66.0
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 6.8e-82 308.1 249 65.1
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 2.0e-81 306.6 252 65.5
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 4.4e-81 305.4 312 57.7
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 4.4e-81 305.4 252 66.3
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 4.4e-81 305.4 250 64.4
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 5.8e-81 305.1 252 65.9
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 5.8e-81 305.1 250 63.2
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 9.8e-81 304.3 250 64.8
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 1.7e-80 303.5 249 63.5
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 2.2e-80 303.1 252 65.5
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 4.9e-80 302.0 250 64.0
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 4.9e-80 302.0 241 67.6
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 6.4e-80 301.6 250 64.8
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 8.3e-80 301.2 262 61.8
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.4e-79 300.4 274 61.7
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 5.4e-79 298.5 250 63.2
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 1.6e-78 297.0 250 62.4
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 1.6e-78 297.0 250 66.0
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 2.7e-78 296.2 250 63.6
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 3.5e-78 295.8 250 62.8
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 6.0e-78 295.0 250 62.4
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 1.3e-77 293.9 250 63.2
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 2.3e-77 293.1 251 64.5
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 5.0e-77 292.0 250 63.2
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 5.0e-77 292.0 250 60.4
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 5.0e-77 292.0 250 62.0
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 1.1e-76 290.8 252 63.9
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.5e-76 290.4 252 62.3
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 3.3e-76 289.3 250 62.0
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 4.3e-76 288.9 251 61.8
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.6e-75 287.0 250 63.6
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 3.6e-75 285.8 250 63.2
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 3.1e-74 282.7 250 62.4
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 5.2e-74 282.0 249 59.4
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 5.2e-74 282.0 241 63.5
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 1.2e-73 280.8 249 59.0
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 7.5e-73 278.1 249 59.0
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 9.8e-73 277.7 249 58.2
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 9.8e-73 277.7 360 48.9
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 2.2e-72 276.6 249 58.6
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 2.2e-72 276.6 256 60.2
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 2.2e-72 276.6 249 58.2
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 2.9e-72 276.2 249 57.8
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 2.9e-72 276.2 250 59.6
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 3.7e-72 275.8 250 60.8
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 8.3e-72 274.6 249 58.2
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 1.1e-71 274.2 249 58.2
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 1.4e-71 273.9 249 58.2
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.4e-71 273.9 322 52.2
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.9e-71 273.5 249 59.0
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 1.9e-71 273.5 249 59.0
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 2.4e-71 273.1 249 58.2
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 4.1e-71 272.3 249 57.8
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 7.0e-71 271.6 249 57.8
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 9.2e-71 271.2 249 56.6
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 3.5e-70 269.2 241 60.6
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 1.5e-68 263.8 251 57.4
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 2.8e-67 259.6 220 63.6
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 5.2e-66 255.4 250 58.0
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 9.9e-65 251.1 234 58.1
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 3.2e-63 246.1 202 65.8
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 1.4e-58 230.7 187 66.3
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 5.8e-57 225.3 250 48.4
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 5.8e-57 225.3 184 65.2
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 2.2e-56 223.4 141 79.4
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 2.4e-55 219.9 184 65.2
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 5.4e-55 218.8 184 63.0
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 3.5e-54 216.1 198 60.6
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 1.7e-53 213.8 282 46.8
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.5e-52 210.7 169 66.9
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 2.5e-52 209.9 141 75.2
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 4.3e-52 209.1 249 47.8
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 1.8e-50 203.8 251 46.6
Ah.13g077510 Amaranthus hybridus HOM05D004531 ORTHO05D005484 5.4e-47 192.2 249 48.2
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 1.7e-45 187.2 117 81.2
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 2.3e-45 186.8 138 67.4
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 2.4e-42 176.8 253 42.3
MCO16G699 Micromonas commoda HOM05D004531 ORTHO05D005484 9.0e-42 174.9 260 42.7
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 4.9e-40 169.1 260 41.9
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 1.9e-39 167.2 111 74.8
Carub.0007s2695 Capsella rubella HOM05D004531 ORTHO05D005484 2.4e-39 166.8 196 49.0
PRCOL_00003072 Prasinoderma coloniale HOM05D004531 ORTHO05D005484 4.6e-38 162.5 265 40.4
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 5.1e-37 159.1 139 61.9
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 8.7e-37 158.3 158 53.8
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 2.1e-35 153.7 159 52.8
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 8.1e-35 151.8 237 41.8
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 1.4e-34 151.0 122 68.9
Cre13.g573050 Chlamydomonas reinhardtii HOM05D004531 ORTHO05D005484 5.3e-34 149.1 291 36.8
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 1.1e-31 141.4 141 53.2
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 2.6e-25 120.2 111 58.6
CSS0027948 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 4.9e-24 115.9 109 60.6
Psat3g051800 Pisum sativum HOM05D004531 ORTHO05D005484 1.8e-21 107.5 111 52.3
Zm00001eb262530 Zea mays HOM05D000031 ORTHO05D445172 1.3e-19 101.3 71 63.4
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 6.3e-19 99.0 123 43.9
PSO210G0815 Papaver somniferum HOM05D004531 ORTHO05D005484 5.0e-16 89.4 77 63.6
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 6.5e-16 89.0 145 40.0
CDE07G1261 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 1.4e-15 87.8 60 68.3
ATR1096G046 Amborella trichopoda HOM05D004531 ORTHO05D005484 1.2e-14 84.7 64 64.1
Gohir.A06G180400 Gossypium hirsutum HOM05D004531 ORTHO05D005484 4.6e-14 82.8 54 79.6
ECA238G1549 Erigeron canadensis HOM05D004531 ORTHO05D005484 6.1e-14 82.4 55 65.5
Haze_26248 Corylus avellana HOM05D004531 ORTHO05D005484 7.9e-14 82.0 129 38.0
Cfa023089 Carpinus fangiana HOM05D004531 ORTHO05D005484 1.8e-13 80.9 137 38.7
Zm00001eb180730 Zea mays HOM05D004531 ORTHO05D005484 6.7e-13 79.0 70 54.3
MD03G1213700 Malus domestica HOM05D004531 ORTHO05D005484 1.5e-12 77.8 48 85.4
SalBow8G3341 Salvia bowleyana HOM05D004531 ORTHO05D005484 1.4e-10 71.2 104 46.2
Oeu059360.1 Olea europaea HOM05D004531 ORTHO05D005484 5.3e-10 69.3 86 43.0
Oeu059364.1 Olea europaea HOM05D004531 ORTHO05D290784 1.0e-08 65.1 61 50.8
MD03G1213500 Malus domestica HOM05D004531 ORTHO05D246742 1.9e-07 60.8 36 83.3
TAR633G0556 Trochodendron aralioides HOM05D004531 ORTHO05D005484 5.5e-07 59.3 38 71.1
Oeu059357.1 Olea europaea HOM05D004531 ORTHO05D005484 1.2e-06 58.2 50 56.0
PSO210G7246 Papaver somniferum HOM05D000014 ORTHO05D000016 7.9e-06 55.5 40 65.0


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