Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 2.4e-104 382.5 242 100.0
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.0e-22 109.8 163 63.2
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 4.4e-21 105.9 149 63.1
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.6e-18 97.4 150 39.3
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 1.9e-16 90.5 151 37.7
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 1.9e-16 90.5 225 33.8
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 1.9e-16 90.5 63 79.4
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 4.2e-16 89.4 186 35.5
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 5.5e-16 89.0 218 31.7
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 5.5e-16 89.0 172 51.7
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 7.2e-16 88.6 147 39.5
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.2e-15 87.8 187 35.8
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 2.1e-15 87.0 173 35.8
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 4.7e-15 85.9 63 71.4
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 6.1e-15 85.5 55 80.0
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 6.1e-15 85.5 173 51.4
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 6.1e-15 85.5 145 38.6
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 1.4e-14 84.3 55 78.2
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.4e-14 84.3 55 78.2
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 5.2e-14 82.4 142 38.0
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.6e-13 80.1 129 55.0
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 2.6e-13 80.1 129 58.9
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 1.7e-12 77.4 142 35.9
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 2.8e-12 76.6 166 49.4
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 4.9e-12 75.9 145 58.6
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 6.3e-12 75.5 136 53.7
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 8.3e-12 75.1 129 47.3
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 1.4e-11 74.3 137 42.3
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 1.8e-11 73.9 136 37.5
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 7.0e-11 72.0 130 35.4
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 9.2e-11 71.6 159 44.7
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 2.0e-10 70.5 57 61.4
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.0e-10 70.5 61 59.0
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 2.7e-10 70.1 54 63.0
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 3.5e-10 69.7 220 34.5
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 7.7e-10 68.6 141 35.5
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 1.0e-09 68.2 57 57.9
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 1.3e-09 67.8 135 41.5
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.7e-09 67.4 61 57.4
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 2.3e-09 67.0 134 54.5
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 2.9e-09 66.6 63 55.6
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 3.8e-09 66.2 135 53.3
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 1.9e-08 63.9 56 57.1
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 3.3e-08 63.2 62 54.8
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.3e-08 63.2 184 33.7
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 3.3e-08 63.2 63 54.0
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 4.3e-08 62.8 57 52.6
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 5.6e-08 62.4 130 30.8
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 5.6e-08 62.4 45 62.2
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 5.6e-08 62.4 45 62.2
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 5.6e-08 62.4 57 52.6
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 7.3e-08 62.0 63 54.0
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 7.3e-08 62.0 58 55.2
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 7.3e-08 62.0 67 55.2
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 7.3e-08 62.0 45 64.4
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 2.1e-07 60.5 56 55.4
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 2.1e-07 60.5 231 38.5
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 2.8e-07 60.1 52 55.8
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 2.8e-07 60.1 43 67.4
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 3.6e-07 59.7 144 33.3
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 3.6e-07 59.7 44 65.9
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 3.6e-07 59.7 57 54.4
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 3.6e-07 59.7 57 54.4
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 3.6e-07 59.7 57 54.4
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 4.7e-07 59.3 145 40.7
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 6.1e-07 58.9 59 52.5
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 8.0e-07 58.5 58 53.4
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 2.3e-06 57.0 66 48.5
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 3.0e-06 56.6 53 54.7
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 3.0e-06 56.6 60 48.3
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 4.0e-06 56.2 127 33.1
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 4.0e-06 56.2 57 47.4
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 5.2e-06 55.8 145 30.3
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 6.8e-06 55.5 47 57.4
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 6.8e-06 55.5 54 51.9
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 6.8e-06 55.5 48 56.2
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 8.9e-06 55.1 58 46.6
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 8.9e-06 55.1 59 47.5


User provided reference genes

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