Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 6.0e-73 277.3 133 100.0
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.3e-51 206.5 133 78.2
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.7e-46 189.5 132 69.7
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 2.0e-44 182.6 132 66.7
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 4.5e-44 181.4 132 65.9
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 6.5e-43 177.6 132 65.2
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 7.2e-42 174.1 132 70.5
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 1.0e-40 170.2 133 67.7
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 1.4e-40 169.9 132 65.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 3.9e-40 168.3 133 66.9
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 5.2e-40 167.9 132 65.2
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 8.8e-40 167.2 142 64.1
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 8.8e-40 167.2 133 63.2
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 1.5e-39 166.4 132 62.9
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 1.3e-38 163.3 137 64.2
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.3e-38 163.3 132 62.1
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 1.3e-38 163.3 132 65.9
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 1.7e-38 162.9 132 61.4
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 3.7e-38 161.8 133 61.7
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 3.7e-38 161.8 132 64.4
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 3.7e-38 161.8 127 63.8
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 4.8e-38 161.4 133 63.9
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 4.8e-38 161.4 132 62.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 6.3e-38 161.0 137 62.8
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 1.4e-37 159.8 132 62.1
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 2.4e-37 159.1 132 62.1
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 3.1e-37 158.7 140 58.6
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 3.1e-37 158.7 132 61.4
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 4.1e-37 158.3 136 61.0
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 2.6e-36 155.6 133 63.2
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 4.5e-36 154.8 132 59.8
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 4.5e-36 154.8 134 59.0
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 4.5e-36 154.8 132 59.8
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 4.5e-36 154.8 133 62.4
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.0e-35 153.7 133 57.1
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 1.3e-35 153.3 135 60.0
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 2.2e-35 152.5 134 57.5
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.2e-35 152.5 134 56.7
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 3.8e-35 151.8 133 56.4
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 5.0e-35 151.4 132 59.1
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 6.5e-35 151.0 133 58.6
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 1.1e-34 150.2 137 59.1
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 1.5e-34 149.8 136 56.6
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.5e-34 149.8 128 61.7
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 1.9e-34 149.4 137 55.5
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 1.9e-34 149.4 133 57.1
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 3.2e-34 148.7 138 56.5
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 4.2e-34 148.3 134 56.7
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 4.2e-34 148.3 139 55.4
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 7.2e-34 147.5 128 60.9
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 9.4e-34 147.1 133 56.4
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 9.4e-34 147.1 133 56.4
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 1.2e-33 146.7 137 55.5
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 1.6e-33 146.4 133 59.4
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 1.6e-33 146.4 131 59.5
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 2.1e-33 146.0 133 55.6
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 2.1e-33 146.0 133 55.6
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 2.1e-33 146.0 133 55.6
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 2.1e-33 146.0 133 54.1
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 2.1e-33 146.0 141 56.7
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 3.6e-33 145.2 137 55.5
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 6.1e-33 144.4 136 54.4
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.8e-32 142.9 132 58.3
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.8e-32 142.9 137 54.0
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.8e-32 142.9 137 54.0
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 2.3e-32 142.5 137 53.3
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 3.0e-32 142.1 137 52.6
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 6.8e-32 141.0 132 58.3
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 8.8e-32 140.6 139 53.2
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 4.4e-31 138.3 135 53.3
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 5.7e-31 137.9 137 53.3
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 5.7e-31 137.9 141 53.2
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 2.2e-30 136.0 136 54.4
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 2.2e-30 136.0 168 49.4
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 8.3e-30 134.0 126 57.1
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 1.1e-29 133.7 126 57.1
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 4.1e-29 131.7 144 50.7
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 2.0e-28 129.4 154 48.1
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 4.5e-28 128.3 102 61.8
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 5.5e-26 121.3 140 48.6
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 1.0e-24 117.1 99 59.6
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 2.3e-24 115.9 94 61.7
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 2.6e-23 112.5 140 50.0
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 3.4e-23 112.1 136 47.1
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 3.4e-23 112.1 136 47.1
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 9.8e-23 110.5 111 53.2
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.8e-22 109.0 97 58.8
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 3.1e-21 105.5 98 56.1
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 4.1e-21 105.1 130 43.1
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.7e-20 102.4 93 57.0
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 3.5e-20 102.1 102 58.8
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 3.5e-20 102.1 119 49.6
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 1.1e-18 97.1 76 59.2
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 2.1e-17 92.8 92 55.4
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 8.0e-17 90.9 147 40.8
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 4.0e-16 88.6 98 51.0
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 7.5e-15 84.3 122 41.0
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 4.9e-14 81.6 80 55.0
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 8.3e-14 80.9 80 48.8
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 3.5e-12 75.5 87 44.8
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 3.5e-12 75.5 79 53.2
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 5.0e-11 71.6 80 51.2
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 1.1e-10 70.5 101 41.6
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 1.7e-06 56.6 62 41.9
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 4.9e-06 55.1 72 43.1


User provided reference genes

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