Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1128300 Malus domestica HOM05D014620 ORTHO05D016319 1.6e-58 230.7 290 100.0
MD11G1122400 Malus domestica HOM05D000162 ORTHO05D000090 5.4e-14 82.8 57 70.2
MD11G1117500 Malus domestica HOM05D010115 ORTHO05D014601 2.3e-12 77.4 53 67.9
Prupe.6G093300 Prunus persica HOM05D000162 ORTHO05D000090 1.5e-11 74.7 51 72.5
RcHm_v2.0_Chr6g0265891 Rosa chinensis HOM05D010115 ORTHO05D000090 1.1e-09 68.6 51 68.6
RcHm_v2.0_Chr6g0265911 Rosa chinensis HOM05D010115 ORTHO05D000090 2.4e-09 67.4 51 66.7
RcHm_v2.0_Chr5g0078541 Rosa chinensis HOM05D009346 ORTHO05D012019 6.9e-09 65.9 55 61.8
RcHm_v2.0_Chr5g0027691 Rosa chinensis HOM05D009709 ORTHO05D003288 3.4e-08 63.5 44 68.2
FAN11G2427 Fragaria x ananassa HOM05D014620 ORTHO05D016319 5.8e-08 62.8 54 55.6
RcHm_v2.0_Chr5g0076121 Rosa chinensis HOM05D010115 ORTHO05D014601 5.8e-08 62.8 49 63.3
RcHm_v2.0_Chr5g0069221 Rosa chinensis HOM05D010115 ORTHO05D014601 9.9e-08 62.0 50 60.0
AUR62005276 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.8e-07 60.1 54 53.7
AUR62005303 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.8e-07 60.1 54 53.7
RcHm_v2.0_Chr5g0076111 Rosa chinensis HOM05D014620 ORTHO05D016319 3.8e-07 60.1 45 64.4
EL10Ac4g09779 Beta vulgaris HOM05D004640 ORTHO05D005489 8.4e-07 58.9 53 52.8
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 8.4e-07 58.9 50 56.0
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-06 58.5 50 58.0
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 1.1e-06 58.5 50 58.0
Ah.06g190010 Amaranthus hybridus HOM05D000162 ORTHO05D000090 1.4e-06 58.2 52 53.8
Hund27505 Selenicereus undatus HOM05D021897 ORTHO05D010954 1.4e-06 58.2 53 52.8
EL10Ac4g09782 Beta vulgaris HOM05D000162 ORTHO05D000090 2.5e-06 57.4 53 50.9
AUR62017647 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.5e-06 57.4 52 51.9
MD11G1128800 Malus domestica HOM05D000162 ORTHO05D000090 3.2e-06 57.0 33 81.8
AUR62005166 Chenopodium quinoa HOM05D001413 ORTHO05D003288 4.2e-06 56.6 52 53.8
AUR62005167 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.2e-06 56.6 52 53.8
AUR62005214 Chenopodium quinoa HOM05D000162 ORTHO05D003288 4.2e-06 56.6 52 53.8
AUR62006790 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.2e-06 56.6 52 46.2
FAN16G3170 Fragaria x ananassa HOM05D000162 ORTHO05D000090 4.2e-06 56.6 51 54.9
FAN21G0796 Fragaria x ananassa HOM05D014620 ORTHO05D016319 4.2e-06 56.6 41 65.9
RcHm_v2.0_Chr5g0069341 Rosa chinensis HOM05D014620 ORTHO05D016319 4.2e-06 56.6 40 60.0
AUR62005305 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.5e-06 56.2 52 53.8
AUR62005307 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.5e-06 56.2 52 53.8
Ah.13g076900 Amaranthus hybridus HOM05D000162 ORTHO05D000090 7.1e-06 55.8 52 50.0
EL10Ac4g09780 Beta vulgaris HOM05D000162 ORTHO05D000090 7.1e-06 55.8 53 50.9
AUR62000443 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.1e-06 55.8 52 44.2
AUR62004849 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.3e-06 55.5 52 51.9
RcHm_v2.0_Chr5g0062141 Rosa chinensis HOM05D014620 ORTHO05D016319 9.3e-06 55.5 40 60.0


User provided reference genes

Program Settings