Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1050900 Malus domestica HOM05D000009 ORTHO05D004635 1.7e-27 125.2 58 100.0
Prupe.1G163700 Prunus persica HOM05D000009 ORTHO05D000008 2.9e-11 71.2 55 60.0
FAN09G2088 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.9e-11 70.5 54 57.4
MD11G1050400 Malus domestica HOM05D000009 ORTHO05D000008 1.4e-10 68.9 53 64.2
MD11G1047000 Malus domestica HOM05D000009 ORTHO05D000008 4.1e-10 67.4 53 60.4
Prupe.1G164000 Prunus persica HOM05D000009 ORTHO05D000008 2.1e-09 65.1 53 54.7
FvH4_4g13530 Fragaria vesca HOM05D000009 ORTHO05D004635 2.7e-09 64.7 54 51.9
FvH4_6g15220 Fragaria vesca HOM05D000009 ORTHO05D000008 2.7e-09 64.7 58 60.3
FAN02G1962 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.7e-09 64.7 56 64.3
FAN09G2823 Fragaria x ananassa HOM05D000009 ORTHO05D004635 3.5e-09 64.3 54 51.9
FAN09G3643 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.6e-09 63.9 52 53.8
MD11G1051600 Malus domestica HOM05D000009 ORTHO05D000008 4.6e-09 63.9 47 63.8
FAN05G1998 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.8e-09 63.2 53 50.9
FAN05G4974 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.0e-08 62.8 53 54.7
FAN09G2656 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.0e-08 62.8 46 56.5
MD11G1051100 Malus domestica HOM05D000009 ORTHO05D000008 1.3e-08 62.4 47 61.7
FAN02G0874 Fragaria x ananassa HOM05D000009 ORTHO05D004635 3.0e-08 61.2 52 53.8
FAN02G2931 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.0e-08 61.2 47 55.3
FAN05G0867 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.0e-08 61.2 46 56.5
FAN17G2915 Fragaria x ananassa HOM05D000009 ORTHO05D004635 3.0e-08 61.2 48 58.3
RcHm_v2.0_Chr4g0418881 Rosa chinensis HOM05D000002 ORTHO05D000001 3.0e-08 61.2 54 53.7
FvH4_6g48310 Fragaria vesca HOM05D000009 ORTHO05D000008 5.1e-08 60.5 45 55.6
FAN05G5574 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.1e-08 60.5 46 54.3
FAN14G2122 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.1e-08 60.5 53 56.6
Prupe.6G243700 Prunus persica HOM05D000009 ORTHO05D000008 5.1e-08 60.5 52 57.7
MD11G1054600 Malus domestica HOM05D000009 ORTHO05D000008 6.6e-08 60.1 51 60.8
FAN02G0362 Fragaria x ananassa HOM05D000009 ORTHO05D000008 8.6e-08 59.7 52 51.9
MD02G1071900 Malus domestica HOM05D000009 ORTHO05D000008 8.6e-08 59.7 50 60.0
FAN09G1611 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-07 59.3 52 50.0
FAN09G2737 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.1e-07 59.3 52 50.0
MD03G1048000 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-07 58.5 55 52.7
Prupe.1G163800 Prunus persica HOM05D000009 ORTHO05D000008 1.9e-07 58.5 55 52.7
FvH4_6g47050 Fragaria vesca HOM05D000009 ORTHO05D000008 2.5e-07 58.2 45 53.3
RcHm_v2.0_Chr1g0317761 Rosa chinensis HOM05D000009 ORTHO05D000008 2.5e-07 58.2 52 57.7
MD02G1071400 Malus domestica HOM05D000009 ORTHO05D000008 3.3e-07 57.8 48 58.3
FAN14G0458 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.3e-07 57.4 45 53.3
MD03G1054400 Malus domestica HOM05D000009 ORTHO05D000008 4.3e-07 57.4 47 59.6
RcHm_v2.0_Chr4g0412461 Rosa chinensis HOM05D000009 ORTHO05D000008 4.3e-07 57.4 53 50.9
RcHm_v2.0_Chr4g0414521 Rosa chinensis HOM05D000009 ORTHO05D000008 4.3e-07 57.4 54 51.9
RcHm_v2.0_Chr1g0317871 Rosa chinensis HOM05D000009 ORTHO05D000008 5.6e-07 57.0 53 54.7
RcHm_v2.0_Chr4g0417651 Rosa chinensis HOM05D000009 ORTHO05D000008 5.6e-07 57.0 55 50.9
RcHm_v2.0_Chr4g0418861 Rosa chinensis HOM05D000009 ORTHO05D000008 5.6e-07 57.0 55 50.9
Prupe.1G159600 Prunus persica HOM05D000009 ORTHO05D000008 7.3e-07 56.6 54 51.9
MD11G1056000 Malus domestica HOM05D000009 ORTHO05D000008 9.5e-07 56.2 44 61.4
FAN14G3082 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.2e-06 55.8 45 51.1
Prupe.2G067500 Prunus persica HOM05D000009 ORTHO05D000008 1.6e-06 55.5 55 47.3
MD02G1070800 Malus domestica HOM05D000009 ORTHO05D004635 2.1e-06 55.1 52 55.8
RcHm_v2.0_Chr4g0417531 Rosa chinensis HOM05D000009 ORTHO05D000008 2.1e-06 55.1 50 54.0
RcHm_v2.0_Chr3g0452091 Rosa chinensis HOM05D000009 ORTHO05D000008 2.8e-06 54.7 50 52.0
RcHm_v2.0_Chr4g0417701 Rosa chinensis HOM05D000009 ORTHO05D000008 2.8e-06 54.7 51 52.9
RcHm_v2.0_Chr4g0418791 Rosa chinensis HOM05D000009 ORTHO05D000008 3.6e-06 54.3 54 53.7
FAN09G1024 Fragaria x ananassa HOM05D000009 ORTHO05D000008 4.7e-06 53.9 53 49.1
Lj6P51T8 Lonicera japonica HOM05D000009 ORTHO05D004635 4.7e-06 53.9 54 51.9
RcHm_v2.0_Chr1g0317831 Rosa chinensis HOM05D000009 ORTHO05D000008 4.7e-06 53.9 50 54.0
RcHm_v2.0_Chr4g0417011 Rosa chinensis HOM05D000009 ORTHO05D000008 4.7e-06 53.9 53 52.8
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 8.1e-06 53.1 53 49.1
MD02G1070300 Malus domestica HOM05D000009 ORTHO05D000008 8.1e-06 53.1 52 51.9
MD11G1046800 Malus domestica HOM05D000009 ORTHO05D004635 8.1e-06 53.1 42 64.3


User provided reference genes

Program Settings