Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 1.3e-272 942.6 501 100.0
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 9.0e-154 547.7 476 66.0
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 2.0e-153 546.6 476 66.2
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.6e-153 546.2 476 66.0
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.6e-153 546.2 475 66.3
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 4.5e-153 545.4 410 74.9
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 4.1e-146 522.3 476 63.9
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 7.7e-145 518.1 462 65.6
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 3.8e-144 515.8 541 57.1
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 3.0e-141 506.1 476 60.5
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 1.5e-140 503.8 540 55.6
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 6.3e-139 498.4 539 56.0
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 2.5e-135 486.5 514 56.0
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 4.7e-134 482.3 514 56.0
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 3.9e-125 452.6 511 53.2
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 4.4e-124 449.1 531 52.0
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 1.7e-123 447.2 530 50.9
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 2.8e-123 446.4 531 51.4
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 3.7e-123 446.0 496 54.0
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 4.8e-123 445.7 522 52.5
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 7.0e-122 441.8 516 51.6
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 1.2e-121 441.0 527 51.2
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.2e-121 441.0 516 51.0
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.3e-120 437.6 517 50.3
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 2.9e-120 436.4 520 50.8
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 5.0e-120 435.6 506 51.8
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 6.5e-120 435.3 484 55.4
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 1.5e-119 434.1 510 50.8
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.5e-116 424.1 509 51.7
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 2.6e-116 423.3 516 50.6
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 6.3e-115 418.7 488 52.0
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 1.8e-114 417.2 506 51.4
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 1.8e-114 417.2 505 50.9
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 5.5e-111 405.6 256 87.1
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 7.2e-111 405.2 512 48.6
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 6.3e-107 392.1 535 48.2
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 1.8e-106 390.6 458 53.3
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 1.8e-106 390.6 513 48.1
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 3.1e-106 389.8 540 46.3
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 2.7e-105 386.7 495 49.7
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 5.9e-105 385.6 480 50.2
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 2.9e-104 383.3 457 52.1
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 2.9e-104 383.3 522 47.5
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 3.8e-104 382.9 466 50.0
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 5.0e-104 382.5 433 54.7
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 5.0e-104 382.5 522 47.5
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.5e-103 380.9 479 50.5
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.5e-103 380.2 479 50.5
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 3.3e-103 379.8 511 48.1
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 5.5e-103 379.0 506 48.8
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 9.5e-103 378.3 503 47.9
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.2e-102 377.9 505 47.5
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 4.7e-102 375.9 505 47.3
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 2.3e-101 373.6 486 47.7
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.3e-101 373.6 463 49.7
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 5.2e-101 372.5 511 46.6
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 3.7e-99 366.3 412 52.7
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 5.4e-98 362.5 494 46.2
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 7.0e-98 362.1 497 45.5
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 1.6e-97 360.9 507 44.6
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 3.5e-97 359.8 479 47.2
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 8.6e-96 355.1 508 44.7
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 6.1e-94 349.0 502 45.6
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 1.8e-93 347.4 489 45.4
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 1.2e-92 344.7 537 42.8
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 2.3e-88 330.5 486 43.4
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 2.3e-88 330.5 486 43.4
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 3.9e-88 329.7 491 44.6
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 4.0e-85 319.7 479 43.4
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 5.4e-82 309.3 321 55.1
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 9.5e-79 298.5 276 60.9
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 8.1e-78 295.4 461 43.2
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 1.1e-77 295.0 411 47.2
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 6.8e-77 292.4 273 61.5
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 8.9e-77 292.0 498 40.4
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 1.2e-76 291.6 334 50.6
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 2.6e-76 290.4 596 35.1
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 4.4e-76 289.7 330 51.8
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 7.6e-76 288.9 283 57.6
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 4.9e-75 286.2 268 57.8
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 5.4e-74 282.7 398 47.2
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 7.1e-74 282.3 296 55.1
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 1.2e-73 281.6 268 58.6
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.3e-71 273.5 461 40.6
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 1.2e-70 271.6 342 49.7
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 6.2e-70 269.2 422 42.7
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 6.2e-70 269.2 409 45.0
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.5e-68 264.6 244 60.2
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 2.1e-62 244.2 147 89.8
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 3.6e-62 243.4 588 31.8
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 5.3e-61 239.6 267 50.9
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 8.4e-59 232.3 399 41.1
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.0e-56 225.3 610 31.0
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 9.6e-55 218.8 283 45.6
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.1e-53 215.3 283 45.2
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 1.3e-48 198.4 271 45.8
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 2.8e-38 164.1 242 41.3
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 3.0e-32 144.1 340 35.3
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.4e-26 125.2 116 59.5
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 1.5e-23 115.2 87 62.1
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.4e-18 98.6 276 28.3
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 7.2e-18 96.3 83 60.2
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 6.7e-16 89.7 169 42.6
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.8e-14 84.3 66 60.6
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 8.0e-09 66.2 75 54.7
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 8.8e-08 62.8 55 60.0


User provided reference genes

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