Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 5.0e-165 584.3 286 100.0
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.2e-147 526.6 286 88.5
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 1.6e-147 526.2 286 88.5
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 3.6e-147 525.0 286 88.8
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.4e-146 523.1 285 88.4
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 2.3e-146 522.3 286 88.8
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.5e-145 519.6 286 88.8
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.5e-145 519.6 286 88.8
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 2.6e-145 518.8 287 84.7
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 2.6e-145 518.8 286 88.5
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 2.6e-145 518.8 270 92.2
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 3.3e-145 518.5 287 87.8
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 5.7e-145 517.7 287 86.4
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 5.3e-143 511.1 287 86.1
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 1.2e-142 510.0 284 87.0
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.0e-142 509.2 287 85.7
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 7.7e-142 507.3 287 85.4
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 2.2e-141 505.8 285 86.0
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 8.5e-141 503.8 287 83.6
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.2e-140 501.9 284 83.8
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 9.4e-140 500.4 287 83.6
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.7e-139 498.8 286 83.6
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 3.6e-139 498.4 284 84.2
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 4.7e-139 498.0 284 83.8
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 6.1e-139 497.7 284 84.2
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 6.1e-139 497.7 287 82.6
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 6.1e-139 497.7 284 83.5
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 8.0e-139 497.3 284 83.8
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.0e-138 496.9 284 83.1
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 1.0e-138 496.9 287 83.6
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.3e-138 495.7 284 83.8
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 2.3e-138 495.7 287 82.2
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 3.0e-138 495.4 298 80.5
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 6.8e-138 494.2 285 82.5
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 2.6e-137 492.3 285 82.1
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 4.4e-137 491.5 285 82.5
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 4.4e-137 491.5 287 80.1
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 5.7e-137 491.1 285 82.1
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 5.7e-137 491.1 287 79.8
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 1.3e-136 490.0 272 87.5
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.7e-136 489.6 285 82.5
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.7e-136 489.6 282 84.0
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 3.7e-136 488.4 294 79.6
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 6.3e-136 487.6 283 82.0
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.4e-135 486.5 287 79.4
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.8e-135 486.1 287 80.8
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 4.1e-135 485.0 287 78.7
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 5.4e-135 484.6 285 82.5
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.2e-134 483.4 285 81.8
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.6e-134 483.0 286 80.4
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 2.7e-134 482.3 285 82.8
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 7.7e-134 480.7 288 80.6
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 7.7e-134 480.7 285 81.8
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.0e-133 480.3 285 82.5
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.0e-133 480.3 288 78.1
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.3e-133 479.9 285 81.4
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.3e-133 479.9 287 79.4
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.7e-133 479.6 284 81.3
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 2.9e-133 478.8 287 77.7
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 3.8e-133 478.4 288 78.1
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 5.0e-133 478.0 286 80.4
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 3.2e-132 475.3 309 75.7
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.6e-131 473.0 283 79.2
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 2.7e-131 472.2 287 76.0
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 4.7e-131 471.5 281 81.9
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 4.7e-131 471.5 287 80.8
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 1.0e-130 470.3 286 78.7
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.4e-130 469.9 285 80.0
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.8e-130 469.5 278 78.8
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.2e-129 466.8 287 77.4
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 2.6e-129 465.7 286 79.4
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.3e-128 463.4 287 74.6
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 6.3e-128 461.1 325 70.2
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 8.3e-128 460.7 286 75.5
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 3.1e-127 458.8 286 75.5
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 5.4e-127 458.0 288 75.0
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 9.2e-127 457.2 287 74.2
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 1.6e-126 456.4 269 81.8
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 3.5e-126 455.3 282 77.7
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 4.5e-126 454.9 269 81.4
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 4.5e-126 454.9 269 81.4
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.3e-125 453.4 290 75.2
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 3.8e-125 451.8 287 73.5
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.2e-121 440.3 286 74.1
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 4.4e-121 438.3 277 74.7
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 3.2e-119 432.2 283 71.4
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 5.9e-118 427.9 246 84.1
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.9e-116 422.9 269 73.2
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.6e-115 419.9 268 74.3
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.8e-114 416.4 262 75.6
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 2.3e-114 416.0 285 68.4
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 7.0e-111 404.4 280 70.7
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.6e-110 403.3 283 68.6
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 1.7e-109 399.8 280 70.7
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 9.5e-108 394.0 285 67.4
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 4.7e-107 391.7 246 75.2
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 2.9e-104 382.5 239 78.7
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.0e-101 372.5 213 83.6
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 3.9e-93 345.5 262 61.8
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 1.7e-80 303.5 175 83.4
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 9.6e-76 287.7 258 51.2
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 4.5e-73 278.9 258 51.9
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 4.6e-70 268.9 252 51.2
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.3e-68 262.7 260 48.5
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.4e-55 220.7 151 73.5
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.1e-50 203.0 110 89.1
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.7e-48 197.2 252 41.3
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 1.0e-45 188.0 162 64.2
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 6.7e-45 185.3 306 41.8
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 4.4e-44 182.6 105 80.0
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 4.1e-42 176.0 193 50.8
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 5.7e-36 155.6 94 74.5
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.3e-35 152.1 95 76.8
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 9.1e-34 148.3 88 78.4
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 8.5e-32 141.7 77 85.7
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 4.2e-23 112.8 67 80.6
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 4.2e-23 112.8 66 81.8
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 4.9e-11 72.8 41 78.0
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.1e-06 55.8 48 60.4


User provided reference genes

Program Settings