Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 2.5e-131 472.2 258 100.0
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 2.1e-61 240.0 126 96.8
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 3.5e-61 239.2 129 95.3
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 8.1e-58 228.0 129 91.5
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 4.2e-54 215.7 129 85.3
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 5.1e-52 208.8 129 82.2
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 4.5e-48 195.7 129 78.3
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 3.2e-46 189.5 124 78.2
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 7.2e-46 188.3 144 68.8
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 7.2e-46 188.3 137 73.7
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 9.3e-46 188.0 129 73.6
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 2.1e-45 186.8 125 76.8
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 2.1e-45 186.8 125 76.8
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 1.3e-44 184.1 155 63.2
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 1.8e-44 183.7 129 72.9
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 2.3e-44 183.3 130 70.0
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 3.9e-44 182.6 130 70.8
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 5.1e-44 182.2 129 73.6
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 6.7e-44 181.8 125 75.2
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 8.7e-44 181.4 126 74.6
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 1.1e-43 181.0 126 69.8
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 1.9e-43 180.3 125 73.6
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 3.3e-43 179.5 129 72.9
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 4.3e-43 179.1 128 69.5
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 4.3e-43 179.1 126 73.0
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 5.7e-43 178.7 133 69.2
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 7.4e-43 178.3 128 70.3
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 7.4e-43 178.3 129 71.3
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 9.7e-43 177.9 126 72.2
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 9.7e-43 177.9 160 61.9
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 9.7e-43 177.9 129 71.3
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 9.7e-43 177.9 125 74.4
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 9.7e-43 177.9 129 70.5
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 2.2e-42 176.8 129 69.8
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 2.2e-42 176.8 125 72.0
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 2.8e-42 176.4 129 71.3
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 2.8e-42 176.4 125 69.6
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 4.8e-42 175.6 124 71.8
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 8.2e-42 174.9 124 71.8
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 8.2e-42 174.9 129 69.0
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 3.1e-41 172.9 129 69.0
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 3.1e-41 172.9 129 69.0
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 4.1e-41 172.6 129 68.2
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 6.9e-41 171.8 133 64.7
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 6.9e-41 171.8 132 63.6
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 1.2e-40 171.0 129 68.2
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 1.5e-40 170.6 125 69.6
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 2.0e-40 170.2 133 63.9
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 2.0e-40 170.2 129 65.1
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 3.4e-40 169.5 132 63.6
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 7.7e-40 168.3 132 61.4
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 7.7e-40 168.3 126 65.9
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 1.7e-39 167.2 130 68.5
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 1.7e-39 167.2 126 68.3
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 2.2e-39 166.8 132 61.4
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 3.8e-39 166.0 130 65.4
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 1.1e-38 164.5 129 65.1
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 1.4e-38 164.1 125 68.0
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 5.5e-38 162.2 136 58.8
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 7.2e-38 161.8 135 60.7
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 7.2e-38 161.8 125 67.2
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 2.1e-37 160.2 132 59.8
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 2.1e-37 160.2 141 61.0
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 2.1e-37 160.2 125 62.4
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 3.6e-37 159.5 136 59.6
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 3.6e-37 159.5 129 64.3
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 1.4e-36 157.5 129 65.1
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 1.4e-36 157.5 125 62.4
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 1.8e-36 157.1 152 55.9
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 3.9e-36 156.0 123 65.9
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 3.9e-36 156.0 107 72.0
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 6.7e-36 155.2 142 61.3
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 8.8e-36 154.8 144 59.7
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 1.5e-35 154.1 125 60.8
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 3.3e-35 152.9 129 57.4
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 3.3e-35 152.9 143 58.0
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 7.4e-35 151.8 129 58.9
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 7.4e-35 151.8 125 60.0
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 9.7e-35 151.4 125 59.2
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 9.7e-35 151.4 130 61.5
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 1.1e-33 147.9 161 54.7
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 1.4e-33 147.5 125 57.6
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 1.4e-33 147.5 125 57.6
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 1.5e-32 144.1 127 55.9
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 3.8e-31 139.4 90 76.7
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 2.7e-29 133.3 103 67.0
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 1.0e-28 131.3 125 53.6
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 3.0e-28 129.8 91 72.5
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 3.9e-28 129.4 125 54.4
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 1.5e-27 127.5 91 69.2
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 9.7e-27 124.8 119 53.8
MD17G1282900 Malus domestica HOM05D007198 ORTHO05D008969 7.0e-25 118.6 58 100.0
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 1.3e-23 114.4 91 62.6
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 1.0e-20 104.8 78 62.8
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 8.8e-20 101.7 147 40.8
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 4.4e-19 99.4 91 51.6
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 1.3e-18 97.8 79 63.3
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 2.8e-18 96.7 147 37.4
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 2.0e-16 90.5 78 56.4
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 1.3e-15 87.8 78 56.4
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 6.5e-15 85.5 125 38.4
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 9.4e-14 81.6 119 38.7
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 2.7e-13 80.1 160 31.9
Hund16330 Selenicereus undatus HOM05D007198 ORTHO05D008969 4.0e-12 76.3 47 80.9


User provided reference genes

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