Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 6.7e-66 253.8 125 100.0
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 6.1e-51 204.1 129 82.9
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 2.5e-36 155.6 127 70.1
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 5.5e-36 154.5 112 73.2
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 4.5e-30 134.8 127 62.2
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 5.9e-30 134.4 131 63.4
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 1.7e-29 132.9 133 62.4
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 2.3e-26 122.5 128 50.8
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 4.0e-26 121.7 116 54.3
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 1.7e-24 116.3 125 55.2
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 3.2e-23 112.1 126 52.4
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 7.8e-22 107.5 143 49.0
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 1.7e-21 106.3 128 49.2
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 3.0e-21 105.5 125 49.6
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 5.0e-21 104.8 132 50.8
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 6.6e-21 104.4 143 44.8
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.9e-20 102.8 115 53.0
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 2.5e-20 102.4 114 50.0
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 7.3e-20 100.9 130 50.8
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.8e-19 99.0 111 49.5
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 2.8e-19 99.0 111 49.5
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.3e-18 95.9 112 48.2
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 4.0e-18 95.1 132 47.0
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 3.4e-17 92.0 112 50.9
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 4.4e-17 91.7 121 47.9
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 4.4e-17 91.7 114 51.8
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 7.5e-17 90.9 110 50.0
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 2.9e-16 89.0 126 47.6
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 2.9e-16 89.0 91 56.0
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 2.9e-16 89.0 75 64.0
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 1.9e-15 86.3 82 62.2
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 4.1e-15 85.1 109 47.7
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 2.1e-14 82.8 88 52.3
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 3.5e-14 82.0 81 56.8
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 4.6e-14 81.6 95 54.7
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 7.8e-14 80.9 111 44.1
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 7.8e-14 80.9 114 45.6
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 1.7e-13 79.7 68 58.8
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 2.3e-13 79.3 95 52.6
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 2.3e-13 79.3 95 52.6
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 2.3e-13 79.3 110 46.4
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 5.1e-13 78.2 68 63.2
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 5.1e-13 78.2 101 47.5
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 8.6e-13 77.4 97 50.5
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 8.6e-13 77.4 95 52.6
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 8.6e-13 77.4 95 52.6
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 1.1e-12 77.0 101 45.5
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 1.1e-12 77.0 89 55.1
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 1.1e-12 77.0 115 43.5
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 3.3e-12 75.5 60 63.3
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 5.6e-12 74.7 97 47.4
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 1.2e-11 73.6 106 48.1
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 1.6e-11 73.2 95 48.4
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 2.1e-11 72.8 103 44.7
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 2.8e-11 72.4 94 45.7
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 4.7e-11 71.6 77 51.9
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 6.2e-11 71.2 96 46.9
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 8.1e-11 70.9 69 56.5
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 8.1e-11 70.9 69 56.5
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 3.1e-10 68.9 61 60.7
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 6.8e-10 67.8 85 47.1
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 9.9e-09 63.9 67 56.7
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 1.3e-08 63.5 68 52.9
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 1.9e-07 59.7 74 47.3


User provided reference genes

Program Settings