Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 1.1e-75 286.6 153 100.0
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 3.8e-63 245.0 131 90.8
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 3.2e-62 241.9 128 85.9
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 4.2e-62 241.5 129 85.3
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 9.4e-62 240.4 152 75.0
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 9.4e-62 240.4 128 85.2
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 3.6e-61 238.4 128 84.4
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 1.0e-60 236.9 128 84.4
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 2.8e-58 228.8 152 79.6
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 6.3e-58 227.6 151 72.2
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 4.2e-54 214.9 130 74.6
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 5.5e-54 214.5 129 75.2
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.0e-52 210.3 129 72.9
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.4e-52 209.9 129 73.6
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.8e-52 209.5 154 67.5
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 4.0e-52 208.4 130 73.8
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 1.2e-51 206.8 124 77.4
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 2.0e-51 206.1 128 75.0
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 3.4e-51 205.3 131 72.5
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 5.7e-51 204.5 130 73.1
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 1.7e-50 203.0 131 72.5
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 2.8e-50 202.2 129 72.1
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 6.3e-50 201.1 129 69.8
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 6.3e-50 201.1 130 71.5
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 1.1e-49 200.3 130 70.8
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 3.1e-49 198.7 132 71.2
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 5.4e-49 198.0 130 71.5
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 9.1e-49 197.2 128 71.9
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 9.1e-49 197.2 130 71.5
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.2e-48 196.8 130 70.8
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.6e-48 196.4 127 70.1
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 2.0e-48 196.1 130 70.8
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 2.0e-48 196.1 128 70.3
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 2.7e-48 195.7 131 69.5
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 4.5e-48 194.9 152 64.5
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 7.7e-48 194.1 126 70.6
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.3e-47 193.4 152 63.8
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 3.8e-47 191.8 152 62.5
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 5.0e-47 191.4 142 64.1
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 1.5e-46 189.9 130 69.2
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 1.5e-46 189.9 120 71.7
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 4.7e-45 184.9 130 63.8
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 6.1e-45 184.5 122 68.0
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 8.0e-45 184.1 132 64.4
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 1.4e-44 183.3 131 64.1
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 2.3e-44 182.6 132 66.7
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 1.2e-43 180.3 129 65.1
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 2.6e-43 179.1 129 69.0
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 2.6e-43 179.1 133 60.9
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 3.4e-43 178.7 128 62.5
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 4.4e-43 178.3 128 63.3
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 5.7e-43 177.9 131 63.4
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 7.5e-43 177.6 155 56.1
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 9.8e-43 177.2 125 63.2
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.7e-42 176.4 153 55.6
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 3.7e-42 175.3 129 61.2
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 6.3e-42 174.5 129 62.0
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 8.3e-42 174.1 132 60.6
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 1.1e-41 173.7 131 61.1
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 2.4e-41 172.6 131 60.3
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 2.4e-41 172.6 131 60.3
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 2.4e-41 172.6 131 60.3
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 2.4e-41 172.6 129 61.2
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 3.1e-41 172.2 131 59.5
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 4.1e-41 171.8 122 64.8
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 5.4e-41 171.4 121 62.8
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 9.2e-41 170.6 132 59.1
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 9.2e-41 170.6 131 59.5
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.2e-41 170.6 129 61.2
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 1.2e-40 170.2 132 58.3
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 1.2e-40 170.2 132 58.3
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 1.2e-40 170.2 132 58.3
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.2e-40 170.2 132 58.3
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 1.6e-40 169.9 129 59.7
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 3.5e-40 168.7 126 61.9
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 4.5e-40 168.3 126 61.1
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 5.9e-40 167.9 132 58.3
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 7.7e-40 167.5 130 59.2
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 1.0e-39 167.2 122 60.7
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.3e-39 166.8 130 58.5
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 1.7e-39 166.4 130 57.7
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 2.3e-39 166.0 129 61.2
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 2.3e-39 166.0 129 58.1
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 6.6e-39 164.5 126 60.3
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.1e-38 163.7 121 62.8
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 3.3e-38 162.2 134 57.5
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 7.3e-38 161.0 120 59.2
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 8.0e-37 157.5 133 56.4
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.8e-36 156.4 129 57.4
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 4.0e-36 155.2 123 58.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 2.0e-35 152.9 154 50.0
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 4.4e-35 151.8 122 57.4
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 6.4e-34 147.9 131 53.4
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.8e-33 146.4 125 56.0
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 4.1e-33 145.2 101 68.3
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.2e-32 143.7 137 51.1
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 1.2e-32 143.7 131 57.3
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.5e-32 142.1 121 51.2
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.5e-32 142.1 121 51.2
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.5e-32 142.1 121 51.2
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.6e-32 141.7 137 51.1
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.3e-31 140.2 120 54.2
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 2.3e-31 139.4 124 51.6
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.3e-31 139.4 127 49.6
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 5.0e-31 138.3 124 50.8
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 8.6e-31 137.5 127 52.8
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 8.0e-29 131.0 129 48.8
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 5.2e-28 128.3 132 51.5
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.2e-27 127.1 122 50.0
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.3e-26 123.6 132 46.2
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.2e-25 119.0 121 47.1
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 4.1e-25 118.6 121 44.6
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 3.5e-24 115.5 108 54.6
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.6e-21 106.7 127 43.3
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 4.0e-20 102.1 84 54.8
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.0e-19 99.8 97 44.3
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.1e-17 94.0 129 42.6
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 2.4e-17 92.8 129 33.3
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 4.1e-17 92.0 127 34.6
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.1e-16 89.7 129 41.9
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 2.6e-11 72.8 109 36.7
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 2.9e-10 69.3 155 32.3
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 6.4e-10 68.2 36 77.8
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 2.4e-09 66.2 48 58.3
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 3.5e-08 62.4 164 31.1
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 7.3e-06 54.7 53 52.8


User provided reference genes

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