Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1111400 Malus domestica HOM05D001083 ORTHO05D031080 6.3e-79 297.4 149 100.0
MD15G1382300 Malus domestica HOM05D001083 ORTHO05D001637 7.3e-43 177.6 111 83.8
Prupe.1G528500 Prunus persica HOM05D001083 ORTHO05D001637 3.4e-40 168.7 110 79.1
MD08G1194200 Malus domestica HOM05D001083 ORTHO05D001637 2.4e-38 162.5 111 75.7
RcHm_v2.0_Chr7g0237261 Rosa chinensis HOM05D001083 ORTHO05D001637 9.5e-35 150.6 113 71.7
FAN08G2447 Fragaria x ananassa HOM05D001083 ORTHO05D001637 2.8e-34 149.1 113 74.3
FAN04G0690 Fragaria x ananassa HOM05D001083 ORTHO05D001637 1.1e-33 147.1 113 73.5
FvH4_5g35670 Fragaria vesca HOM05D001083 ORTHO05D001637 3.1e-33 145.6 113 72.6
FAN18G4577 Fragaria x ananassa HOM05D001083 ORTHO05D001637 3.1e-33 145.6 113 72.6
FAN13G0758 Fragaria x ananassa HOM05D001083 ORTHO05D001637 4.4e-32 141.7 113 70.8
QL09p017299 Quercus lobata HOM05D001083 ORTHO05D001637 2.8e-26 122.5 106 62.3
Cpa.g.sc309.2 Carica papaya HOM05D001083 ORTHO05D001637 8.1e-26 120.9 107 63.6
GSVIVG01009148001 Vitis vinifera HOM05D001083 ORTHO05D001637 1.4e-25 120.2 100 68.0
CiPaw.07G167400 Carya illinoinensis HOM05D001083 ORTHO05D001637 1.8e-25 119.8 112 60.7
Haze_22336 Corylus avellana HOM05D001083 ORTHO05D001637 4.0e-25 118.6 132 52.3
TAR381G0262 Trochodendron aralioides HOM05D001083 ORTHO05D001637 4.0e-25 118.6 107 61.7
Cfa013696 Carpinus fangiana HOM05D001083 ORTHO05D001637 3.4e-24 115.5 127 53.5
TAR381G1168 Trochodendron aralioides HOM05D001083 ORTHO05D001637 4.4e-24 115.2 107 60.7
TWI56G0184 Tripterygium wilfordii HOM05D001083 ORTHO05D001637 7.6e-24 114.4 115 57.4
Phvul.008G180300 Phaseolus vulgaris HOM05D001083 ORTHO05D001637 2.9e-23 112.5 109 58.7
arahy.Tifrunner.gnm1.ann1.WC25VJ Arachis hypogaea HOM05D001083 ORTHO05D001637 1.1e-22 110.5 108 56.5
VMungo0647G2201 Vigna mungo HOM05D001083 ORTHO05D001637 1.1e-22 110.5 114 52.6
arahy.Tifrunner.gnm1.ann1.BPHJ2T Arachis hypogaea HOM05D001083 ORTHO05D001637 1.4e-22 110.2 108 56.5
Glyma.14G180600 Glycine max HOM05D001083 ORTHO05D001637 7.1e-22 107.8 114 55.3
CiPaw.08G054500 Carya illinoinensis HOM05D001083 ORTHO05D001637 9.3e-22 107.5 112 57.1
Duzib093G0227 Durio zibethinus HOM05D001083 ORTHO05D001637 2.7e-21 105.9 110 56.4
Ca_05404_v3 Cicer arietinum L. HOM05D001083 ORTHO05D001637 3.5e-21 105.5 110 51.8
DCAR_019306 Daucus carota HOM05D001083 ORTHO05D001637 6.0e-21 104.8 118 50.8
Medtr5g065900 Medicago truncatula HOM05D001083 ORTHO05D001637 6.0e-21 104.8 110 53.6
Glyma.02G212700 Glycine max HOM05D001083 ORTHO05D001637 2.3e-20 102.8 115 53.0
Dinv42628 Davidia involucrata HOM05D001083 ORTHO05D001637 3.0e-20 102.4 111 55.0
TAR625G0327 Trochodendron aralioides HOM05D001083 ORTHO05D001637 3.9e-20 102.1 107 56.1
Lalb_Chr04g0252951 Lupinus albus HOM05D001083 ORTHO05D001637 6.6e-20 101.3 109 56.9
CsaV3_3G047900 Cucumis sativus L. HOM05D001083 ORTHO05D001637 8.7e-20 100.9 120 47.5
LjContig00408g0016994 Lotus japonicus HOM05D001083 ORTHO05D001637 8.7e-20 100.9 108 53.7
MELO3C003532.2 Cucumis melo HOM05D001083 ORTHO05D001637 1.1e-19 100.5 107 53.3
Manes.02G146300 Manihot esculenta HOM05D001083 ORTHO05D001637 1.9e-19 99.8 117 53.8
Eucgr.F00407 Eucalyptus grandis HOM05D001083 ORTHO05D001637 2.5e-19 99.4 121 48.8
Atru.chr13.1039 Acer truncatum HOM05D001083 ORTHO05D001637 4.3e-19 98.6 123 50.4
Dinv44843 Davidia involucrata HOM05D001083 ORTHO05D001637 7.3e-19 97.8 111 52.3
Nn5g29925 Nelumbo nucifera HOM05D001083 ORTHO05D001637 7.3e-19 97.8 109 56.0
Potri.002G104100 Populus trichocarpa HOM05D001083 ORTHO05D001637 7.3e-19 97.8 107 55.1
CANSAT25G2442 Cannabis sativa HOM05D001083 ORTHO05D001637 2.1e-18 96.3 116 51.7
ClCG11G014490 Citrullus lanatus HOM05D001083 ORTHO05D001637 2.1e-18 96.3 121 47.9
Psat2g066480 Pisum sativum HOM05D001083 ORTHO05D001637 2.1e-18 96.3 110 50.0
Thecc.08G068700 Theobroma cacao HOM05D001083 ORTHO05D001637 3.6e-18 95.5 108 53.7
Duzib041G0389 Durio zibethinus HOM05D001083 ORTHO05D001637 8.1e-18 94.4 110 51.8
Oeu022181.1 Olea europaea HOM05D001083 ORTHO05D001637 1.4e-17 93.6 116 50.9
Sabra02G0081600 Salix brachista HOM05D001083 ORTHO05D001637 1.8e-17 93.2 105 54.3
Actinidia10374 Actinidia chinensis HOM05D001083 ORTHO05D001637 2.4e-17 92.8 75 65.3
Actinidia30817 Actinidia chinensis HOM05D001083 ORTHO05D001637 4.0e-17 92.0 107 53.3
Ciclev10000059m.g Citrus clementina HOM05D001083 ORTHO05D001637 5.3e-17 91.7 110 50.0
Sc01g0001080 Simmondsia chinensis HOM05D001083 ORTHO05D001637 5.3e-17 91.7 98 55.1
Sopen04g030070 Solanum pennellii HOM05D001083 ORTHO05D001637 5.3e-17 91.7 141 45.4
Sed0007107 Sechium edule HOM05D001083 ORTHO05D001637 6.9e-17 91.3 119 47.1
Solyc04g076100.4 Solanum lycopersicum HOM05D001083 ORTHO05D001637 6.9e-17 91.3 141 45.4
TPR.G16018 Trifolium pratense HOM05D001083 ORTHO05D001637 1.5e-16 90.1 111 45.9
Gohir.A05G220800 Gossypium hirsutum HOM05D001083 ORTHO05D001637 3.4e-16 89.0 110 50.0
Nitab4.5_0003300g0020 Nicotiana tabacum HOM05D001083 ORTHO05D001637 5.8e-16 88.2 141 43.3
Sed0013781 Sechium edule HOM05D001083 ORTHO05D001637 5.8e-16 88.2 100 51.0
Gorai.009G230700 Gossypium raimondii HOM05D001083 ORTHO05D001637 7.6e-16 87.8 110 50.0
Aqoxy5G01324 Aquilegia oxysepala HOM05D001083 ORTHO05D001637 1.7e-15 86.7 103 49.5
Peaxi162Scf00281g00321 Petunia axillaris HOM05D001083 ORTHO05D001637 1.7e-15 86.7 115 50.4
Rhsim06G0073500 Rhododendron simsii HOM05D001083 ORTHO05D001637 1.7e-15 86.7 112 48.2
Gohir.A02G077800 Gossypium hirsutum HOM05D001083 ORTHO05D001637 2.2e-15 86.3 115 47.8
CSS0007953 Camellia sinensis var. sinensis HOM05D001083 ORTHO05D001637 3.8e-15 85.5 109 53.2
Nitab4.5_0000131g0450 Nicotiana tabacum HOM05D001083 ORTHO05D001637 4.9e-15 85.1 149 40.9
MBI02_g09037_MAGBIO Magnolia biondii HOM05D001083 ORTHO05D001637 6.4e-15 84.7 114 49.1
Lj4C734T9 Lonicera japonica HOM05D001083 ORTHO05D001637 1.1e-14 84.0 98 57.1
vmacro21322 Vaccinium macrocarpon HOM05D001083 ORTHO05D001637 1.1e-14 84.0 112 48.2
CSS0042788 Camellia sinensis var. sinensis HOM05D001083 ORTHO05D001637 1.4e-14 83.6 109 52.3
PGR042G0314 Punica granatum HOM05D001083 ORTHO05D001637 1.4e-14 83.6 105 49.5
Aqoxy6G01457 Aquilegia oxysepala HOM05D001083 ORTHO05D001637 4.2e-14 82.0 126 44.4
THA.LOC104806846 Tarenaya hassleriana HOM05D001083 ORTHO05D001637 7.1e-14 81.3 102 52.9
Lalb_Chr17g0344441 Lupinus albus HOM05D001083 ORTHO05D001637 9.3e-14 80.9 108 46.3
PGR031G0695 Punica granatum HOM05D001083 ORTHO05D001637 9.3e-14 80.9 113 45.1
Ah.05g170700 Amaranthus hybridus HOM05D001083 ORTHO05D001637 2.7e-13 79.3 107 50.5
Cc10_g15680 Coffea canephora HOM05D001083 ORTHO05D001637 1.3e-12 77.0 104 50.0
Lsat_1_v5_gn_6_104860 Lactuca sativa HOM05D001083 ORTHO05D001637 1.8e-12 76.6 121 44.6
Hund27010 Selenicereus undatus HOM05D001083 ORTHO05D001637 2.5e-11 72.8 107 49.5
EL10Ac1g01078 Beta vulgaris HOM05D001083 ORTHO05D001637 5.6e-11 71.6 111 48.6
HanXRQChr10g0278081 Helianthus annuus HOM05D001083 ORTHO05D001637 9.6e-11 70.9 108 43.5
AUR62019024 Chenopodium quinoa HOM05D001083 ORTHO05D001637 2.8e-10 69.3 107 47.7
AUR62027861 Chenopodium quinoa HOM05D001083 ORTHO05D001637 2.8e-10 69.3 104 48.1
Gohir.D02G085000 Gossypium hirsutum HOM05D001083 ORTHO05D001637 3.7e-10 68.9 115 42.6
ECA246G4856 Erigeron canadensis HOM05D001083 ORTHO05D001637 6.2e-10 68.2 104 48.1
Cc07_g14270 Coffea canephora HOM05D001083 ORTHO05D001637 3.4e-08 62.4 72 47.2
CSS0045832 Camellia sinensis var. sinensis HOM05D001083 ORTHO05D001637 4.5e-08 62.0 88 42.0
HanXRQChr15g0484801 Helianthus annuus HOM05D001083 ORTHO05D001637 4.5e-08 62.0 100 47.0
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 5.8e-08 61.6 109 43.1
HPP92_013342 Vanilla planifolia HOM05D001083 ORTHO05D001637 2.2e-07 59.7 120 38.3
Ciclev10024732m.g Citrus clementina HOM05D001083 ORTHO05D001637 2.9e-07 59.3 99 41.4
PSO017G3393 Papaver somniferum HOM05D001083 ORTHO05D001637 2.9e-07 59.3 111 42.3
PSO170G2511 Papaver somniferum HOM05D001083 ORTHO05D001637 2.9e-07 59.3 108 42.6
HPP92_013349 Vanilla planifolia HOM05D001083 ORTHO05D001637 6.4e-07 58.2 120 37.5
ATR0022G064 Amborella trichopoda HOM05D001083 ORTHO05D031080 1.1e-06 57.4 109 35.8
Cpa.g.sc55.39 Carica papaya HOM05D001083 ORTHO05D031080 1.4e-06 57.0 81 44.4
Lsat_1_v5_gn_9_74021 Lactuca sativa HOM05D001083 ORTHO05D001637 2.4e-06 56.2 130 36.9
TWI74G0030 Tripterygium wilfordii HOM05D001083 ORTHO05D001637 9.3e-06 54.3 88 36.4


User provided reference genes

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