Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 1.1e-63 246.5 132 100.0
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 5.6e-55 217.6 132 86.4
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 7.1e-50 200.7 132 81.1
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 8.7e-48 193.7 132 77.3
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 1.1e-47 193.4 132 76.5
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.1e-42 176.8 133 71.4
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 2.5e-42 175.6 132 68.9
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 1.0e-40 170.2 148 68.2
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 6.7e-40 167.5 139 68.3
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 3.3e-39 165.2 146 64.4
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 9.7e-39 163.7 135 69.6
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 1.3e-38 163.3 133 63.9
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 1.6e-38 162.9 135 69.6
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.2e-38 162.5 136 66.2
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.1e-37 160.2 124 67.7
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.6e-36 155.6 147 60.5
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 2.6e-36 155.6 132 65.2
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 3.4e-36 155.2 140 66.4
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 4.5e-36 154.8 147 59.9
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.3e-35 153.3 142 66.2
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 3.8e-35 151.8 124 63.7
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 8.5e-35 150.6 133 63.9
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 8.5e-35 150.6 133 63.9
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 8.5e-35 150.6 133 63.9
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 1.9e-34 149.4 127 63.0
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.2e-34 148.7 127 62.2
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 7.2e-34 147.5 127 61.4
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 1.6e-33 146.4 135 62.2
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.7e-33 145.6 133 62.4
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 1.0e-32 143.7 136 62.5
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 1.0e-32 143.7 175 52.0
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 3.0e-32 142.1 137 61.3
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 3.0e-32 142.1 135 62.2
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 2.5e-31 139.0 133 59.4
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 2.5e-31 139.0 135 60.0
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 2.5e-31 139.0 133 59.4
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 3.3e-31 138.7 133 60.9
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 5.7e-31 137.9 133 60.9
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.7e-30 136.3 136 62.5
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 1.4e-29 133.3 148 57.4
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 2.4e-29 132.5 119 63.9
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 5.3e-29 131.3 136 56.6
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 9.1e-29 130.6 124 59.7
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.2e-28 130.2 128 57.8
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 1.2e-28 130.2 87 74.7
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-28 129.8 138 55.8
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 5.9e-28 127.9 123 57.7
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 7.7e-28 127.5 133 57.9
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 7.7e-28 127.5 133 57.9
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 7.7e-28 127.5 133 57.9
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 3.8e-27 125.2 129 54.3
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 5.0e-27 124.8 133 56.4
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 5.0e-27 124.8 133 57.1
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 2.5e-26 122.5 138 58.7
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 3.2e-26 122.1 123 55.3
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 7.2e-26 120.9 91 67.0
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 4.7e-25 118.2 129 56.6
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 6.1e-25 117.9 124 52.4
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 1.0e-24 117.1 114 56.1
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 2.3e-24 115.9 114 55.3
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 3.0e-24 115.5 128 56.2
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 5.1e-24 114.8 130 53.1
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 5.1e-24 114.8 91 65.9
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 5.1e-24 114.8 131 51.9
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.5e-23 113.2 98 66.3
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 2.6e-23 112.5 120 56.7
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 7.4e-23 110.9 125 53.6
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 7.4e-23 110.9 130 52.3
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 1.3e-22 110.2 164 48.8
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 1.3e-22 110.2 125 52.8
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 1.7e-22 109.8 131 51.1
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 1.7e-22 109.8 123 53.7
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 2.2e-22 109.4 119 53.8
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 6.9e-21 104.4 127 52.0
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 6.9e-21 104.4 135 48.9
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 2.0e-20 102.8 125 48.0
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 4.5e-20 101.7 80 66.2
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 1.3e-19 100.1 68 76.5
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.3e-19 100.1 129 47.3
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.3e-19 100.1 129 47.3
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 8.5e-19 97.4 135 48.1
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 8.5e-19 97.4 124 50.8
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 1.9e-18 96.3 110 53.6
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.9e-18 96.3 108 52.8
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 2.5e-18 95.9 125 46.4
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 9.4e-18 94.0 60 73.3
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.6e-17 93.2 67 68.7
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 2.1e-17 92.8 89 67.4
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 2.1e-17 92.8 59 74.6
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.3e-16 89.4 85 64.7
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 8.8e-16 87.4 63 69.8
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 1.3e-14 83.6 112 50.0
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 2.8e-14 82.4 58 70.7
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 3.7e-14 82.0 66 60.6
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 5.3e-13 78.2 93 57.0
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 7.0e-13 77.8 64 60.9
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 1.0e-11 73.9 83 48.2
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 8.0e-09 64.3 63 50.8
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 6.7e-08 61.2 46 63.0
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 2.2e-06 56.2 72 38.9


User provided reference genes

Program Settings