Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 7.3e-63 243.8 131 100.0
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 4.3e-39 164.9 97 90.7
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.8e-38 162.2 96 87.5
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 1.4e-37 159.8 101 80.2
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-37 159.5 97 87.6
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 3.1e-37 158.7 97 85.6
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.1e-37 158.7 97 85.6
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 3.1e-37 158.7 101 81.2
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 4.0e-37 158.3 97 85.6
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 5.3e-37 157.9 101 81.2
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 6.9e-37 157.5 104 79.8
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.2e-36 156.8 101 81.2
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 2.0e-36 156.0 101 79.2
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 2.6e-36 155.6 118 69.5
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 3.4e-36 155.2 101 80.2
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 3.4e-36 155.2 101 80.2
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 7.6e-36 154.1 101 75.2
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 9.9e-36 153.7 101 78.2
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 9.9e-36 153.7 101 77.2
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 9.9e-36 153.7 101 77.2
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.3e-35 153.3 101 79.2
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 1.3e-35 153.3 126 65.9
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 1.3e-35 153.3 101 77.2
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 2.2e-35 152.5 101 77.2
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.2e-35 152.5 101 77.2
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.9e-35 152.1 101 76.2
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 2.9e-35 152.1 101 76.2
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 3.8e-35 151.8 101 74.3
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 3.8e-35 151.8 101 77.2
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 4.9e-35 151.4 101 74.3
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 4.9e-35 151.4 101 76.2
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 6.4e-35 151.0 101 76.2
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.1e-34 150.2 118 67.8
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.1e-34 150.2 118 67.8
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 1.1e-34 150.2 101 77.2
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 1.1e-34 150.2 101 77.2
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.4e-34 149.8 101 74.3
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 1.9e-34 149.4 101 76.2
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 4.2e-34 148.3 123 65.0
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 4.2e-34 148.3 125 64.8
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 5.4e-34 147.9 125 64.8
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 5.4e-34 147.9 100 74.0
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 5.4e-34 147.9 101 73.3
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 7.1e-34 147.5 125 64.8
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 7.1e-34 147.5 126 65.1
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 9.3e-34 147.1 129 64.3
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.2e-33 146.7 118 66.9
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.2e-33 146.7 121 65.3
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 1.2e-33 146.7 100 74.0
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.2e-33 146.7 101 74.3
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.6e-33 146.4 101 74.3
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.6e-33 146.4 100 74.0
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 2.1e-33 146.0 100 74.0
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 4.6e-33 144.8 103 70.9
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 4.6e-33 144.8 118 64.4
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 4.6e-33 144.8 125 64.8
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 6.0e-33 144.4 101 72.3
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 6.0e-33 144.4 100 77.0
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 7.9e-33 144.1 101 73.3
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 7.9e-33 144.1 125 63.2
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 1.0e-32 143.7 101 71.3
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 1.0e-32 143.7 94 76.6
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.3e-32 143.3 101 71.3
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 1.3e-32 143.3 100 76.0
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.7e-32 142.9 125 61.6
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 3.0e-32 142.1 101 73.3
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 5.1e-32 141.4 125 61.6
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 5.1e-32 141.4 100 73.0
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 5.1e-32 141.4 126 61.1
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 8.7e-32 140.6 125 60.0
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 8.7e-32 140.6 97 75.3
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.1e-31 140.2 91 76.9
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.9e-31 139.4 103 70.9
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 1.9e-31 139.4 101 73.3
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 2.5e-31 139.0 99 73.7
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 2.5e-31 139.0 97 72.2
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 4.3e-31 138.3 101 70.3
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 4.3e-31 138.3 101 70.3
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 4.3e-31 138.3 104 70.2
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 4.3e-31 138.3 101 71.3
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 5.6e-31 137.9 100 74.0
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 5.6e-31 137.9 100 71.0
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 7.4e-31 137.5 101 72.3
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 7.4e-31 137.5 97 74.2
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.3e-30 136.7 101 71.3
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 2.1e-30 136.0 126 59.5
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 3.6e-30 135.2 101 69.3
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 4.8e-30 134.8 101 70.3
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 1.8e-29 132.9 133 57.9
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 4.0e-29 131.7 88 81.8
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 9.0e-29 130.6 91 74.7
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 9.0e-29 130.6 94 69.1
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 7.6e-28 127.5 106 55.7
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 1.4e-26 123.2 106 56.6
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 2.7e-25 119.0 101 58.4
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 3.5e-25 118.6 84 70.2
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.0e-24 117.1 78 82.1
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.8e-24 116.3 81 76.5
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 1.9e-23 112.8 80 70.0
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 4.3e-23 111.7 93 53.8
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 4.8e-22 108.2 65 86.2
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 3.1e-21 105.5 109 51.4
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.0e-21 105.1 63 85.7
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.2e-20 103.6 63 84.1
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.5e-17 92.0 64 70.3
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 6.0e-17 91.3 70 71.4
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 4.8e-14 81.6 84 48.8
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 6.9e-13 77.8 51 76.5
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 9.0e-13 77.4 49 79.6
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.2e-12 77.0 74 62.2
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.7e-11 73.2 80 53.8
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 2.2e-11 72.8 62 66.1
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 5.0e-11 71.6 91 36.3
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 3.2e-10 68.9 45 75.6
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 5.5e-10 68.2 52 67.3
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 7.2e-10 67.8 85 45.9
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 6.1e-09 64.7 71 56.3
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 1.9e-07 59.7 42 66.7
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 4.8e-06 55.1 93 43.0


User provided reference genes

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