Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 1.0e-133 480.3 290 100.0
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 3.0e-101 372.5 290 73.1
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 3.0e-61 239.6 316 54.4
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 8.8e-61 238.0 241 61.8
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-60 237.3 212 67.0
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.5e-60 235.0 241 61.4
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.3e-59 231.5 241 61.0
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 3.0e-48 196.4 242 52.9
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 3.3e-47 193.0 229 54.6
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 4.3e-47 192.6 222 55.0
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 5.6e-47 192.2 250 53.2
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.6e-46 190.7 222 53.6
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 5.2e-45 185.7 229 52.0
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 6.8e-45 185.3 231 54.5
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 6.8e-45 185.3 183 57.9
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 5.8e-44 182.2 239 52.7
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 2.2e-43 180.3 221 51.6
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.9e-43 179.9 255 48.2
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 4.9e-43 179.1 165 61.2
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 4.9e-43 179.1 171 62.0
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 1.1e-42 177.9 199 56.3
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.4e-42 177.6 216 52.3
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.9e-42 177.2 233 49.8
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.9e-42 177.2 242 47.9
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 7.0e-42 175.3 141 67.4
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.0e-41 173.7 245 48.6
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 6.0e-41 172.2 180 56.1
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.0e-40 171.4 154 61.0
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.0e-40 171.4 239 47.7
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.3e-40 170.2 247 47.4
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.3e-40 170.2 236 49.2
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 3.0e-40 169.9 143 65.0
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 3.9e-40 169.5 200 52.0
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 3.9e-40 169.5 181 56.9
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 5.0e-40 169.1 246 46.7
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 6.6e-40 168.7 188 57.4
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.1e-39 167.9 259 49.0
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.1e-39 167.9 174 58.0
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.1e-39 167.9 179 55.3
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.5e-39 167.5 182 56.0
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.5e-39 167.5 182 58.8
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.5e-39 167.5 244 49.6
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.9e-39 167.2 184 58.7
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 2.5e-39 166.8 246 46.7
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 3.3e-39 166.4 208 51.4
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 3.3e-39 166.4 181 57.5
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.3e-39 166.0 228 47.8
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 4.3e-39 166.0 270 46.7
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 4.3e-39 166.0 147 62.6
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 5.6e-39 165.6 220 49.5
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 5.6e-39 165.6 160 59.4
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 7.3e-39 165.2 233 48.9
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 2.8e-38 163.3 144 66.0
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 2.8e-38 163.3 144 66.0
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 6.2e-38 162.2 184 57.1
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 6.2e-38 162.2 238 45.8
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.1e-37 161.4 144 65.3
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.1e-37 161.4 213 50.2
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.4e-37 161.0 205 48.3
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.8e-37 160.6 238 49.2
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 2.3e-37 160.2 243 45.3
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 3.1e-37 159.8 145 60.0
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 3.1e-37 159.8 144 64.6
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 3.1e-37 159.8 144 64.6
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 3.1e-37 159.8 238 47.9
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 4.0e-37 159.5 209 48.8
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.2e-36 157.9 137 61.3
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.2e-36 157.9 244 45.1
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.5e-36 157.5 135 60.0
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.0e-36 157.1 138 62.3
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 4.4e-36 156.0 213 48.8
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 7.5e-36 155.2 176 54.5
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.7e-35 154.1 170 55.9
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.7e-35 154.1 173 52.6
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.2e-35 153.7 226 48.2
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 2.2e-35 153.7 154 57.1
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.2e-35 153.7 185 55.7
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.9e-35 153.3 260 44.6
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 6.4e-35 152.1 200 51.0
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 6.4e-35 152.1 180 51.7
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 8.3e-35 151.8 174 57.5
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.9e-34 150.6 235 46.0
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.9e-34 150.6 185 54.6
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.9e-34 150.6 142 60.6
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 1.9e-34 150.6 228 49.1
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 2.4e-34 150.2 218 48.2
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.2e-34 149.8 142 64.1
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 2.3e-32 143.7 231 45.9
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 5.1e-32 142.5 152 55.3
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.1e-31 141.4 180 54.4
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.9e-31 140.6 153 54.9
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 2.5e-31 140.2 154 55.8
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 3.3e-31 139.8 160 56.9
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.8e-30 136.7 205 49.8
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 8.1e-30 135.2 202 49.0
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.1e-29 134.8 196 51.0
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.1e-29 134.8 196 51.0
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 2.3e-29 133.7 96 74.0
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.3e-29 133.7 224 42.9
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.0e-29 132.9 95 75.8
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 5.2e-29 132.5 98 70.4
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 6.8e-29 132.1 93 75.3
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.6e-28 130.2 93 76.3
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 3.4e-28 129.8 194 48.5
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 3.4e-28 129.8 194 48.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.3e-23 113.2 123 56.1
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 7.3e-23 112.1 141 48.2
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.9e-18 97.4 120 45.8
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.6e-17 94.4 110 48.2
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.6e-17 94.4 112 58.0
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 1.6e-17 94.4 74 71.6
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.1e-17 94.0 79 63.3
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.1e-17 94.0 79 63.3
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.7e-17 93.6 59 76.3
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 4.6e-17 92.8 108 44.4
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.3e-16 90.5 136 39.7
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 3.3e-15 86.7 55 76.4
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 3.4e-12 76.6 47 83.0
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 3.4e-12 76.6 77 58.4
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 5.8e-12 75.9 51 74.5
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 8.1e-06 55.5 118 34.7


User provided reference genes

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