Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 2.1e-103 379.0 187 100.0
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 1.4e-70 270.0 235 66.8
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 7.7e-66 254.2 235 63.4
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 9.7e-61 237.3 236 58.5
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.8e-59 233.0 235 56.6
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.8e-59 233.0 236 57.6
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 5.3e-59 231.5 235 57.4
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 7.0e-59 231.1 265 52.5
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.2e-58 230.3 268 52.2
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 3.5e-58 228.8 235 54.5
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.3e-57 226.9 235 55.3
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.7e-57 226.5 265 51.7
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 3.8e-57 225.3 235 54.9
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 5.0e-57 224.9 235 55.3
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 5.0e-57 224.9 249 52.6
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 5.0e-57 224.9 236 55.5
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 8.5e-57 224.2 235 55.7
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.1e-56 223.8 235 55.7
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.1e-56 223.8 235 55.3
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 1.1e-56 223.8 237 54.9
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.1e-56 223.8 235 54.9
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 1.5e-56 223.4 236 55.1
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.5e-56 223.4 236 54.7
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 1.5e-56 223.4 238 55.0
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.5e-56 223.4 235 55.3
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 4.2e-56 221.9 236 55.9
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 4.2e-56 221.9 235 55.3
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 5.5e-56 221.5 235 54.9
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 9.4e-56 220.7 236 55.1
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 9.4e-56 220.7 235 55.7
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.2e-55 220.3 243 53.9
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 2.1e-55 219.5 235 54.9
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 3.6e-55 218.8 235 54.5
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 3.6e-55 218.8 236 53.8
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 4.7e-55 218.4 235 54.9
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 4.7e-55 218.4 235 54.5
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 4.7e-55 218.4 235 54.9
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 6.1e-55 218.0 236 53.4
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 2.3e-54 216.1 236 53.8
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 4.0e-54 215.3 236 53.0
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 5.2e-54 214.9 238 52.9
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 5.2e-54 214.9 236 52.1
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 8.8e-54 214.2 236 52.1
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 8.8e-54 214.2 236 52.1
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 1.2e-53 213.8 236 52.5
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.6e-53 212.6 235 54.0
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 3.4e-53 212.2 236 51.3
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 4.4e-53 211.8 260 50.0
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 7.5e-53 211.1 236 51.7
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 7.5e-53 211.1 235 54.5
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 9.8e-53 210.7 235 51.5
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.7e-52 209.9 236 51.7
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 2.2e-52 209.5 235 51.1
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 2.2e-52 209.5 279 47.3
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 2.8e-52 209.1 235 54.5
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 6.3e-52 208.0 235 51.1
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 1.1e-51 207.2 235 51.5
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.8e-51 206.5 235 52.8
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 3.1e-51 205.7 286 44.8
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 4.1e-51 205.3 235 49.4
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.6e-50 203.4 235 52.3
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 7.7e-50 201.1 236 48.7
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 1.3e-49 200.3 235 50.6
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 6.5e-49 198.0 257 47.1
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 8.5e-49 197.6 126 77.0
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.5e-48 196.8 235 51.5
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.9e-48 196.4 124 75.8
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.5e-48 196.1 124 79.0
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 4.2e-48 195.3 142 70.4
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.2e-47 193.7 240 48.3
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.6e-47 193.4 235 48.1
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 3.0e-46 189.1 124 78.2
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 5.2e-46 188.3 211 54.0
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 8.8e-46 187.6 124 74.2
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 8.8e-46 187.6 124 74.2
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.2e-45 187.2 260 46.5
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 3.4e-45 185.7 235 45.1
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.7e-44 183.3 124 72.6
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 8.3e-44 181.0 124 72.6
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 9.1e-43 177.6 211 51.2
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.5e-40 169.5 204 50.0
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 6.1e-39 164.9 123 70.7
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 4.1e-35 152.1 325 36.0
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.5e-29 133.7 87 73.6
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 5.6e-16 88.6 46 89.1
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.3e-08 62.8 120 30.0
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.2e-07 60.8 34 82.4
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.8e-06 57.0 123 31.7


User provided reference genes

Program Settings