Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 2.6e-95 352.1 181 100.0
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 1.2e-58 230.3 117 92.3
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 4.1e-56 221.9 116 88.8
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 7.7e-55 217.6 117 86.3
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 1.0e-54 217.2 116 87.1
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.0e-54 217.2 116 87.1
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.7e-54 216.5 116 86.2
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 3.8e-54 215.3 116 86.2
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 6.5e-54 214.5 116 86.2
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 1.2e-50 203.8 117 84.6
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 2.2e-49 199.5 113 82.3
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 4.8e-49 198.4 113 82.3
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 4.8e-49 198.4 117 78.6
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 6.3e-49 198.0 114 80.7
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.1e-48 197.2 115 80.0
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 1.4e-48 196.8 113 81.4
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 1.8e-48 196.4 117 80.3
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.8e-48 196.4 115 77.4
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 7.0e-48 194.5 117 76.9
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 7.0e-48 194.5 117 76.9
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 9.1e-48 194.1 115 76.5
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 9.1e-48 194.1 117 76.9
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 1.2e-47 193.7 113 79.6
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.2e-47 193.7 117 78.6
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 1.2e-47 193.7 114 76.3
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.2e-47 193.7 117 76.9
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.2e-47 193.7 117 76.9
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 1.2e-47 193.7 117 76.9
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 1.2e-47 193.7 115 76.5
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 1.2e-47 193.7 114 79.8
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 1.6e-47 193.4 116 80.2
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.6e-47 193.4 117 77.8
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.6e-47 193.4 117 76.9
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 1.6e-47 193.4 112 79.5
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.0e-47 193.0 117 76.9
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 2.0e-47 193.0 104 86.5
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 4.5e-47 191.8 117 76.1
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 4.5e-47 191.8 117 75.2
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 4.5e-47 191.8 115 74.8
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 5.9e-47 191.4 117 75.2
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 5.9e-47 191.4 114 77.2
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 1.0e-46 190.7 118 78.0
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 1.0e-46 190.7 113 79.6
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 1.0e-46 190.7 116 77.6
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 1.3e-46 190.3 116 77.6
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 1.3e-46 190.3 116 77.6
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 1.3e-46 190.3 116 77.6
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 1.3e-46 190.3 116 77.6
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 1.3e-46 190.3 111 79.3
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 1.7e-46 189.9 116 75.9
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 1.7e-46 189.9 114 77.2
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 2.3e-46 189.5 112 76.8
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 2.3e-46 189.5 117 76.1
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 2.9e-46 189.1 114 76.3
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 3.8e-46 188.7 116 76.7
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 3.8e-46 188.7 118 75.4
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 3.8e-46 188.7 116 76.7
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 3.8e-46 188.7 113 77.0
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 5.0e-46 188.3 116 77.6
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 5.0e-46 188.3 116 77.6
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 5.0e-46 188.3 116 76.7
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 5.0e-46 188.3 116 76.7
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 6.6e-46 188.0 116 76.7
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 6.6e-46 188.0 116 76.7
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 6.6e-46 188.0 116 76.7
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 8.6e-46 187.6 116 76.7
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 8.6e-46 187.6 112 76.8
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 1.1e-45 187.2 116 75.9
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 1.5e-45 186.8 116 76.7
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.9e-45 186.4 115 76.5
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 2.5e-45 186.0 113 77.0
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 3.3e-45 185.7 116 75.0
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 3.3e-45 185.7 116 75.0
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 3.3e-45 185.7 116 75.0
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 3.3e-45 185.7 119 73.1
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 4.2e-45 185.3 113 75.2
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 4.2e-45 185.3 114 75.4
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 4.2e-45 185.3 115 76.5
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 5.5e-45 184.9 116 74.1
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 5.5e-45 184.9 114 76.3
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 1.2e-44 183.7 112 78.6
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 1.6e-44 183.3 104 82.7
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 2.1e-44 183.0 116 75.9
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 2.1e-44 183.0 114 75.4
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 2.1e-44 183.0 115 73.9
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 3.6e-44 182.2 115 75.7
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 3.6e-44 182.2 114 74.6
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 3.6e-44 182.2 116 73.3
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 4.7e-44 181.8 118 73.7
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 6.1e-44 181.4 112 73.2
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 1.4e-43 180.3 114 76.3
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 2.3e-43 179.5 117 71.8
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.3e-43 179.5 105 77.1
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 4.0e-43 178.7 112 74.1
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 4.0e-43 178.7 112 74.1
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 5.2e-43 178.3 116 69.8
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 5.2e-43 178.3 113 74.3
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 6.8e-43 177.9 105 78.1
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 1.2e-42 177.2 137 64.2
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 1.5e-42 176.8 113 73.5
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 2.0e-42 176.4 109 75.2
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 2.0e-42 176.4 113 72.6
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 2.6e-42 176.0 109 74.3
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 3.4e-42 175.6 113 72.6
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 7.5e-42 174.5 103 77.7
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 9.8e-42 174.1 100 78.0
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.3e-41 173.7 113 70.8
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.3e-41 173.7 113 70.8
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 2.2e-41 172.9 112 68.8
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 2.8e-41 172.6 181 54.1
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 3.7e-41 172.2 96 81.2
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 6.3e-41 171.4 113 69.9
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 1.1e-40 170.6 151 58.9
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 2.4e-40 169.5 102 76.5
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 3.1e-40 169.1 127 63.0
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 7.0e-40 167.9 101 75.2
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 4.5e-39 165.2 111 68.5
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 3.9e-38 162.2 102 70.6
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 5.0e-38 161.8 109 67.9
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 6.1e-36 154.8 91 79.1
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.4e-35 153.7 115 66.1
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 3.4e-34 149.1 85 78.8
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 5.6e-29 131.7 114 52.6
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 7.3e-29 131.3 99 59.6
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 1.6e-28 130.2 116 56.9
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 1.1e-27 127.5 116 57.8
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 7.5e-26 121.3 112 50.9
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 9.2e-24 114.4 85 67.1
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 2.1e-23 113.2 116 46.6
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 1.3e-22 110.5 63 76.2
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-20 104.0 114 44.7
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 1.2e-20 104.0 59 78.0
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 1.2e-20 104.0 99 50.5
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 1.6e-20 103.6 99 49.5
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 5.2e-19 98.6 58 86.2
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 1.2e-18 97.4 113 46.9
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 2.0e-18 96.7 83 60.2
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 2.0e-18 96.7 57 71.9
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 3.4e-18 95.9 58 81.0
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 7.5e-18 94.7 55 80.0
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 7.5e-18 94.7 146 39.7
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 4.9e-17 92.0 58 69.0
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.1e-15 86.7 59 67.8
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 7.8e-15 84.7 96 42.7
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 2.8e-12 76.3 55 63.6
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 3.4e-10 69.3 46 65.2
VMungo0540G1094 Vigna mungo HOM05D003030 ORTHO05D006417 2.9e-09 66.2 82 47.6
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 6.4e-09 65.1 116 32.8


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