Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD10G1053600 Malus domestica HOM05D023633 ORTHO05D001590 0.0e+00 1590.9 877 100.0
MD11G1281000 Malus domestica HOM05D023633 ORTHO05D001590 4.8e-134 483.0 312 78.5
MD05G1170800 Malus domestica HOM05D023633 ORTHO05D001590 7.4e-127 459.1 472 50.8
MD10G1053700 Malus domestica HOM05D023633 ORTHO05D245196 4.8e-94 350.1 198 99.5
MD05G1071400 Malus domestica HOM05D001313 ORTHO05D001590 3.2e-37 161.4 276 33.3
MD15G1265900 Malus domestica HOM05D023633 ORTHO05D001590 9.3e-37 159.8 87 89.7
RcHm_v2.0_Chr7g0195461 Rosa chinensis HOM05D001313 ORTHO05D001590 5.8e-31 140.6 265 30.9
RcHm_v2.0_Chr3g0457901 Rosa chinensis HOM05D028871 ORTHO05D001590 7.6e-31 140.2 297 30.3
MD06G1101600 Malus domestica HOM05D001313 ORTHO05D001590 1.1e-29 136.3 313 30.4
FAN18G3588 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.4e-29 134.0 246 32.9
MD06G1101900 Malus domestica HOM05D001313 ORTHO05D001590 1.2e-28 132.9 258 29.5
MD10G1135600 Malus domestica HOM05D001313 ORTHO05D001590 1.2e-28 132.9 235 32.8
FAN08G0328 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.6e-28 132.5 277 30.0
FvH4_5g04060 Fragaria vesca HOM05D001313 ORTHO05D001590 2.1e-28 132.1 265 32.1
FAN18G2114 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.1e-28 132.1 265 32.1
Prupe.5G115000 Prunus persica HOM05D001313 ORTHO05D001590 6.7e-27 127.1 243 29.6
FvH4_6g20108 Fragaria vesca HOM05D023564 ORTHO05D001590 1.5e-23 115.9 209 34.0
FAN16G2686 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.0e-23 115.5 249 31.7
FAN07G1365 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.6e-23 115.2 276 30.1
FAN18G1148 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.4e-23 114.8 250 32.4
FAN28G1211 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.5e-23 114.4 250 31.2
FvH4_7g08490 Fragaria vesca HOM05D001313 ORTHO05D001590 9.9e-23 113.2 250 32.4
FAN21G2565 Fragaria x ananassa HOM05D001313 ORTHO05D001590 9.9e-23 113.2 249 31.3
FAN22G1831 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.3e-22 112.8 276 29.7
FAN19G2309 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.2e-22 112.1 276 29.0
FAN02G0597 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.8e-22 111.3 276 29.7
FAN18G2573 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.9e-22 110.9 249 30.9
FAN19G0965 Fragaria x ananassa HOM05D001313 ORTHO05D001590 4.9e-22 110.9 276 29.7
FAN04G0296 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.4e-22 110.2 333 29.1
FAN12G3449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.4e-22 110.2 249 31.3
FAN08G0758 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-21 109.8 341 28.4
FAN11G1661 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-21 109.8 276 29.3
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-21 109.8 238 27.7
MD06G1101700 Malus domestica HOM05D001313 ORTHO05D001590 1.4e-21 109.4 198 32.8
Rhsim02G0073600 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.4e-21 109.4 237 30.4
FAN05G5162 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-21 109.0 250 31.6
Rhsim01G0084000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.9e-21 109.0 237 30.4
Rhsim04G0033200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-21 108.6 238 28.6
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-21 108.6 238 26.9
RhsimUnG0025400 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-21 108.6 238 27.3
RhsimUnG0063200 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-21 108.6 237 30.4
RhsimUnG0211900 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-21 108.6 237 30.4
FvH4_5g24283 Fragaria vesca HOM05D001313 ORTHO05D001590 3.2e-21 108.2 249 30.9
FvH4_1g28820 Fragaria vesca HOM05D001313 ORTHO05D001590 4.2e-21 107.8 258 31.0
RhsimUnG0145500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.2e-21 107.8 238 28.6
FAN04G0896 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.5e-21 107.5 273 28.9
RhsimUnG0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-20 105.9 238 28.2
FAN04G0718 Fragaria x ananassa HOM05D001313 ORTHO05D001590 2.7e-20 105.1 305 27.2
FAN06G5077 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.7e-20 105.1 239 25.5
FAN16G1555 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.7e-20 105.1 242 25.6
FAN16G3252 Fragaria x ananassa HOM05D011367 ORTHO05D001590 2.7e-20 105.1 242 25.6
RcHm_v2.0_Chr4g0421591 Rosa chinensis HOM05D001313 ORTHO05D001590 2.7e-20 105.1 241 29.9
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 4.6e-20 104.4 245 26.5
CSS0022103 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.0e-19 103.2 238 27.3
FvH4_5g07921 Fragaria vesca HOM05D011367 ORTHO05D001590 2.3e-19 102.1 242 24.8
RcHm_v2.0_Chr1g0318221 Rosa chinensis HOM05D001313 ORTHO05D001590 2.3e-19 102.1 230 28.3
FvH4_3g44640 Fragaria vesca HOM05D001313 ORTHO05D001590 5.1e-19 100.9 236 28.8
CSS0034250 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.9e-18 99.0 229 27.1
FvH4_7g07291 Fragaria vesca HOM05D016428 ORTHO05D017916 1.9e-18 99.0 171 34.5
FAN15G1451 Fragaria x ananassa HOM05D012588 ORTHO05D001590 5.6e-18 97.4 328 25.3
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 9.6e-18 96.7 273 25.3
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 1.6e-17 95.9 243 28.4
Rhsim05G0036100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-17 95.9 252 28.2
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 2.8e-17 95.1 247 25.1
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.8e-17 95.1 243 28.4
Rhsim12G0031000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.7e-17 94.7 253 28.1
Rhsim02G0220500 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-17 94.4 252 27.8
RhsimUnG0230900 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-17 94.4 252 27.8
Rhsim04G0174600 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-17 94.0 248 26.6
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 8.1e-17 93.6 247 25.1
FAN12G3821 Fragaria x ananassa HOM05D001313 ORTHO05D001590 8.1e-17 93.6 195 31.8
Rhsim12G0033500 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.1e-17 93.6 247 28.3
RcHm_v2.0_Chr3g0460221 Rosa chinensis HOM05D001313 ORTHO05D001590 8.1e-17 93.6 205 28.8
vmacro23477 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 8.1e-17 93.6 238 30.3
FAN18G1449 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-16 93.2 234 29.5
Rhsim08G0213000 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-16 93.2 242 25.6
RhsimUnG0232600 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-16 92.0 242 25.6
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.3e-16 90.9 252 27.0
Rhsim08G0211500 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.3e-16 90.9 242 25.6
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.9e-16 90.5 240 26.7
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.2e-15 89.7 238 24.8
FvH4_2g10140 Fragaria vesca HOM05D012588 ORTHO05D001590 1.5e-15 89.4 331 24.5
MD14G1121200 Malus domestica HOM05D001313 ORTHO05D001590 1.5e-15 89.4 218 27.5
FvH4_2g09801 Fragaria vesca HOM05D012588 ORTHO05D001590 3.4e-15 88.2 265 25.3
vmacro14386 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.5e-15 87.8 238 29.8
FvH4_1g20524 Fragaria vesca HOM05D001313 ORTHO05D001590 5.8e-15 87.4 209 30.1
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-14 86.7 244 24.6
Rhsim02G0013800 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.3e-14 86.3 245 25.7
Rhsim13G0048400 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.3e-14 86.3 245 25.7
RhsimUnG0155300 Rhododendron simsii HOM05D007376 ORTHO05D026098 1.3e-14 86.3 245 25.7
FvH4_6g39110 Fragaria vesca HOM05D003258 ORTHO05D010103 2.2e-14 85.5 252 29.0
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.9e-14 85.1 844 20.3
FAN19G1587 Fragaria x ananassa HOM05D001313 ORTHO05D001590 3.8e-14 84.7 246 25.6
FvH4_4g09880 Fragaria vesca HOM05D003258 ORTHO05D010103 6.5e-14 84.0 252 29.0
FAN18G2768 Fragaria x ananassa HOM05D011367 ORTHO05D001590 6.5e-14 84.0 244 22.1
RcHm_v2.0_Chr6g0266151 Rosa chinensis HOM05D012588 ORTHO05D001590 6.5e-14 84.0 263 26.2
FvH4_3g06730 Fragaria vesca HOM05D003258 ORTHO05D010103 8.4e-14 83.6 252 27.8
FAN26G1492 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.4e-14 83.6 260 26.5
FAN22G0854 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.1e-13 83.2 273 25.3
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-13 83.2 844 20.1
RcHm_v2.0_Chr6g0266141 Rosa chinensis HOM05D012588 ORTHO05D001590 2.5e-13 82.0 301 25.2
Rhsim02G0182500 Rhododendron simsii HOM05D007376 ORTHO05D026098 3.2e-13 81.6 232 26.7
FAN28G2048 Fragaria x ananassa HOM05D001313 ORTHO05D001590 5.5e-13 80.9 143 33.6
FvH4_5g37521 Fragaria vesca HOM05D001313 ORTHO05D001590 2.7e-12 78.6 185 31.4
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 3.5e-12 78.2 211 26.1
FAN28G1655 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.8e-11 75.9 230 27.8
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 2.3e-11 75.5 146 26.7
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-11 73.9 152 30.9
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-11 73.9 152 30.9
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-11 73.9 152 30.9
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-11 73.9 152 30.9
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-11 73.9 152 30.9
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-11 73.9 152 30.9
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 6.7e-11 73.9 152 30.9
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 8.7e-11 73.6 190 27.9
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.9e-10 72.4 152 30.3
FAN11G0400 Fragaria x ananassa HOM05D001313 ORTHO05D001590 1.9e-10 72.4 182 31.9
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.3e-10 71.6 152 30.3
Aqoxy5G02562 Aquilegia oxysepala HOM05D001313 ORTHO05D001590 4.3e-10 71.2 110 27.3
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 4.3e-10 71.2 180 24.4
FAN23G2739 Fragaria x ananassa HOM05D003258 ORTHO05D010103 5.7e-10 70.9 248 27.4
CSS0024257 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 9.6e-10 70.1 167 24.0
FAN27G1165 Fragaria x ananassa HOM05D011367 ORTHO05D001590 9.6e-10 70.1 189 24.3
FAN03G0862 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.3e-09 69.7 231 26.8
FAN20G1692 Fragaria x ananassa HOM05D003258 ORTHO05D010103 1.6e-09 69.3 258 25.6
vmacro00903 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.8e-09 68.6 111 30.6
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 4.8e-09 67.8 162 24.7
TWI14G1239 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 8.2e-09 67.0 124 29.8
TWI23G0081 Tripterygium wilfordii HOM05D008484 ORTHO05D007523 8.2e-09 67.0 124 29.8
Lj5A81T87 Lonicera japonica HOM05D053520 ORTHO05D001590 1.1e-08 66.6 135 28.1
FvH4_6g36750 Fragaria vesca HOM05D003258 ORTHO05D010103 1.8e-08 65.9 163 28.2
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.8e-08 65.9 193 24.4
Rhsim05G0009200 Rhododendron simsii HOM05D007376 ORTHO05D007523 2.4e-08 65.5 245 23.3
vmacro21208 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 2.4e-08 65.5 185 25.4
FAN15G3309 Fragaria x ananassa HOM05D012588 ORTHO05D001590 3.1e-08 65.1 313 22.4
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 4.1e-08 64.7 160 27.5
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 5.3e-08 64.3 150 24.7
FAN09G0027 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.9e-08 63.9 232 27.6
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 9.0e-08 63.5 239 23.4
FvH4_7g01271 Fragaria vesca HOM05D023564 ORTHO05D017916 1.2e-07 63.2 99 35.4
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-07 62.8 282 20.6
Rhsim04G0158100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.5e-07 62.8 181 26.5
Aqoxy2G02824 Aquilegia oxysepala HOM05D019735 ORTHO05D019678 2.0e-07 62.4 152 22.4
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 2.0e-07 62.4 174 24.1
FvH4_6g34231 Fragaria vesca HOM05D003258 ORTHO05D010103 2.6e-07 62.0 157 29.3
Rhsim10G0114400 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.4e-07 61.6 218 22.5
vmacro04432 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.0e-06 60.1 183 23.5
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.0e-06 60.1 193 27.5
vmacro15977 Vaccinium macrocarpon HOM05D006123 ORTHO05D007578 2.2e-06 58.9 165 24.8
CSS0047844 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 6.5e-06 57.4 150 24.0
FAN22G0544 Fragaria x ananassa HOM05D003258 ORTHO05D010103 6.5e-06 57.4 210 28.6
FAN08G0122 Fragaria x ananassa HOM05D003258 ORTHO05D010103 8.5e-06 57.0 232 26.7


User provided reference genes

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