Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 1.4e-73 279.6 154 100.0
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 2.3e-63 245.7 123 97.6
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.8e-52 209.5 124 82.3
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 4.9e-50 201.4 118 79.7
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.4e-49 199.9 120 77.5
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.4e-49 199.9 120 77.5
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 4.1e-49 198.4 118 78.0
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 5.4e-49 198.0 120 80.8
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.4e-49 198.0 118 78.8
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 7.0e-49 197.6 118 79.7
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 7.0e-49 197.6 119 76.5
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 2.0e-48 196.1 118 79.7
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 6.0e-48 194.5 119 77.3
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 7.8e-48 194.1 120 80.0
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.3e-47 193.4 118 76.3
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.7e-47 193.0 119 76.5
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.7e-47 193.0 118 78.0
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 2.3e-47 192.6 119 77.3
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 2.3e-47 192.6 118 76.3
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 3.0e-47 192.2 119 77.3
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.0e-47 192.2 118 77.1
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 3.9e-47 191.8 110 82.7
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.0e-47 191.4 117 77.8
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 1.1e-46 190.3 109 86.2
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.5e-46 189.9 118 76.3
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 1.9e-46 189.5 118 75.4
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.5e-46 189.1 118 76.3
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.5e-46 189.1 118 75.4
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 3.3e-46 188.7 118 75.4
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 4.3e-46 188.3 118 75.4
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 4.3e-46 188.3 118 76.3
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 5.6e-46 188.0 120 75.0
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 9.5e-46 187.2 117 75.2
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.2e-45 186.8 117 75.2
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 4.7e-45 184.9 117 74.4
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 6.2e-45 184.5 118 72.0
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.1e-44 183.7 119 69.7
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.4e-44 183.3 119 70.6
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 3.1e-44 182.2 118 70.3
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 6.8e-44 181.0 118 74.6
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 8.9e-44 180.6 118 71.2
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.0e-43 179.5 147 65.3
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 5.8e-43 177.9 120 70.8
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 7.5e-43 177.6 119 68.1
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 9.8e-43 177.2 119 70.6
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 1.7e-42 176.4 120 70.8
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 2.2e-42 176.0 117 72.6
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 2.9e-42 175.6 117 70.1
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 6.4e-42 174.5 118 66.1
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 6.4e-42 174.5 119 72.3
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 6.4e-42 174.5 118 68.6
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 1.1e-41 173.7 117 70.1
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 3.2e-41 172.2 121 71.9
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 4.1e-41 171.8 117 66.7
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 4.1e-41 171.8 140 61.4
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 4.1e-41 171.8 119 67.2
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 5.4e-41 171.4 116 67.2
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 9.2e-41 170.6 118 66.1
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 9.2e-41 170.6 118 66.1
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 9.2e-41 170.6 118 66.1
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 9.2e-41 170.6 118 66.1
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 2.1e-40 169.5 118 68.6
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 2.7e-40 169.1 116 66.4
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 4.6e-40 168.3 100 79.0
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 4.6e-40 168.3 117 70.9
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 6.0e-40 167.9 96 84.4
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 6.0e-40 167.9 118 68.6
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 7.8e-40 167.5 109 75.2
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 1.0e-39 167.2 119 64.7
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.3e-39 166.0 118 63.6
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 5.1e-39 164.9 117 62.4
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 8.6e-39 164.1 119 60.5
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.5e-38 163.3 120 60.8
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 1.9e-38 162.9 117 60.7
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 7.3e-38 161.0 102 72.5
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.2e-37 160.2 120 59.2
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 1.1e-36 157.1 119 58.8
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.8e-36 156.4 120 65.0
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.4e-35 151.8 117 59.8
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.2e-32 143.7 118 60.2
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 2.1e-32 142.9 116 60.3
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 6.6e-31 137.9 118 60.2
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 6.2e-29 131.3 79 79.7
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 4.4e-27 125.2 120 50.0
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 1.7e-26 123.2 77 74.0
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 3.8e-26 122.1 112 51.8
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 9.3e-25 117.5 78 71.8
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 6.6e-23 111.3 80 70.0
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 2.5e-22 109.4 111 49.5
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 9.0e-20 100.9 62 77.4
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.5e-19 100.1 112 49.1
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 8.4e-18 94.4 79 62.0
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.9e-14 83.2 104 44.2
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 4.8e-13 78.6 93 49.5
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.2e-11 73.9 86 46.5
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.1e-06 57.4 41 63.4


User provided reference genes

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