Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 6.0e-100 367.9 236 100.0
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 1.9e-53 213.4 230 62.2
MD17G1278300 Malus domestica HOM05D018099 ORTHO05D020712 2.3e-35 153.3 184 66.8
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 7.5e-34 148.3 241 47.3
RcHm_v2.0_Chr3g0487151 Rosa chinensis HOM05D018099 ORTHO05D020712 8.0e-28 128.3 227 46.7
FvH4_1g26900 Fragaria vesca HOM05D018099 ORTHO05D020712 4.9e-25 119.0 227 51.1
FAN26G2306 Fragaria x ananassa HOM05D018099 ORTHO05D020712 7.0e-24 115.2 217 52.1
FAN19G2429 Fragaria x ananassa HOM05D018099 ORTHO05D020712 1.2e-23 114.4 227 51.1
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 4.9e-17 92.4 212 48.6
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 9.2e-16 88.2 215 38.1
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 3.5e-15 86.3 233 42.5
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 1.0e-14 84.7 215 45.1
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 1.0e-14 84.7 238 47.5
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 3.0e-14 83.2 214 45.8
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 3.0e-14 83.2 218 45.0
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 3.9e-14 82.8 277 28.5
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 6.6e-14 82.0 218 44.5
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 2.5e-13 80.1 220 38.2
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 4.3e-13 79.3 225 34.7
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 5.6e-13 79.0 224 33.9
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 1.2e-12 77.8 226 33.2
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 2.1e-12 77.0 215 43.7
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 2.8e-12 76.6 220 35.9
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 3.6e-12 76.3 220 40.9
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 8.1e-12 75.1 212 34.4
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 1.8e-11 73.9 220 43.6
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 5.2e-11 72.4 216 44.9
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 2.6e-10 70.1 217 44.7
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 2.6e-10 70.1 232 33.2
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 3.4e-10 69.7 248 28.6
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 3.4e-10 69.7 220 35.0
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 5.8e-10 68.9 221 41.2
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 5.8e-10 68.9 236 41.9
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 7.6e-10 68.6 215 32.1
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 2.2e-09 67.0 182 35.7
Sc17g0000300 Simmondsia chinensis HOM05D009814 ORTHO05D004310 2.2e-09 67.0 218 45.0
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 3.7e-09 66.2 215 34.0
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 3.7e-09 66.2 219 39.7
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 6.4e-09 65.5 231 30.3
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.1e-08 64.7 250 42.8
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 1.4e-08 64.3 216 41.7
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 2.4e-08 63.5 214 42.5
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 5.4e-08 62.4 212 27.4
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 5.4e-08 62.4 210 32.9
Rhsim06G0057500 Rhododendron simsii HOM05D009814 ORTHO05D004310 7.1e-08 62.0 223 43.0
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.2e-07 61.2 214 42.1
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 2.7e-07 60.1 207 28.5
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 2.7e-07 60.1 227 41.9
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 4.6e-07 59.3 218 43.6
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.6e-07 59.3 110 39.1
Sed0003021 Sechium edule HOM05D009154 ORTHO05D004310 1.3e-06 57.8 223 35.4
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.3e-06 57.8 226 44.2
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 8.6e-06 55.1 88 39.8


User provided reference genes

Program Settings