Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1278100 Malus domestica HOM05D000226 ORTHO05D000142 5.9e-36 153.7 78 100.0
MD09G1277600 Malus domestica HOM05D000226 ORTHO05D000142 4.7e-17 90.9 56 83.9
MD17G1271100 Malus domestica HOM05D000226 ORTHO05D000142 7.5e-15 83.6 57 71.9
MD09G1277500 Malus domestica HOM05D000226 ORTHO05D000142 5.0e-11 70.9 70 60.0
Prupe.3G015300 Prunus persica HOM05D000226 ORTHO05D000142 6.6e-11 70.5 70 57.1
Haze_14314 Corylus avellana HOM05D000226 ORTHO05D000142 3.3e-10 68.2 75 50.7
MD17G1271000 Malus domestica HOM05D000226 ORTHO05D000142 3.3e-10 68.2 70 57.1
QL02p064766 Quercus lobata HOM05D000226 ORTHO05D000142 3.3e-10 68.2 75 54.7
TWI74G0238 Tripterygium wilfordii HOM05D000226 ORTHO05D000142 1.2e-09 66.2 80 52.5
MD09G1277900 Malus domestica HOM05D000226 ORTHO05D000142 3.6e-09 64.7 70 57.1
Sed0021688 Sechium edule HOM05D000226 ORTHO05D000142 6.2e-09 63.9 74 48.6
CiPaw.03G076700 Carya illinoinensis HOM05D000226 ORTHO05D000142 8.0e-09 63.5 75 50.7
Cfa007758 Carpinus fangiana HOM05D000226 ORTHO05D000142 1.8e-08 62.4 75 48.0
Manes.01G122900 Manihot esculenta HOM05D000226 ORTHO05D000142 4.0e-08 61.2 77 45.5
Actinidia17168 Actinidia chinensis HOM05D000226 ORTHO05D000142 5.2e-08 60.8 81 46.9
Ciclev10006467m.g Citrus clementina HOM05D000226 ORTHO05D000142 5.2e-08 60.8 81 44.4
COL.COLO4_06945 Corchorus olitorius HOM05D000226 ORTHO05D000142 6.8e-08 60.5 73 47.9
MELO3C020321.2 Cucumis melo HOM05D000226 ORTHO05D000142 8.9e-08 60.1 74 45.9
Prupe.5G240900 Prunus persica HOM05D000226 ORTHO05D000142 1.2e-07 59.7 58 55.2
Dinv28237 Davidia involucrata HOM05D000226 ORTHO05D000142 2.0e-07 58.9 71 47.9
Potri.015G034100 Populus trichocarpa HOM05D000226 ORTHO05D000142 2.0e-07 58.9 61 52.5
Cfa020682 Carpinus fangiana HOM05D000226 ORTHO05D000142 2.6e-07 58.5 81 45.7
ClCG05G010710 Citrullus lanatus HOM05D000226 ORTHO05D000142 2.6e-07 58.5 74 45.9
COL.COLO4_04639 Corchorus olitorius HOM05D000226 ORTHO05D000142 3.4e-07 58.2 78 47.4
Duzib205G1134 Durio zibethinus HOM05D000226 ORTHO05D000142 3.4e-07 58.2 78 47.4
QL10p032687 Quercus lobata HOM05D000226 ORTHO05D000142 3.4e-07 58.2 77 48.1
Thecc.10G147300 Theobroma cacao HOM05D000226 ORTHO05D000142 3.4e-07 58.2 78 47.4
RcHm_v2.0_Chr3g0488861 Rosa chinensis HOM05D000226 ORTHO05D000142 7.5e-07 57.0 55 58.2
Haze_18987 Corylus avellana HOM05D000226 ORTHO05D000142 9.8e-07 56.6 77 46.8
Dinv19075 Davidia involucrata HOM05D000226 ORTHO05D000142 9.8e-07 56.6 53 58.5
MD14G1243300 Malus domestica HOM05D000226 ORTHO05D000142 9.8e-07 56.6 57 54.4
Potri.012G038500 Populus trichocarpa HOM05D000226 ORTHO05D000142 9.8e-07 56.6 61 50.8
Sabra12G0026900 Salix brachista HOM05D000226 ORTHO05D000142 9.8e-07 56.6 61 50.8
TAR374G0218 Trochodendron aralioides HOM05D000226 ORTHO05D000142 9.8e-07 56.6 78 46.2
TAR374G0286 Trochodendron aralioides HOM05D000226 ORTHO05D000142 9.8e-07 56.6 78 46.2
Nn1g09755 Nelumbo nucifera HOM05D000226 ORTHO05D000142 1.3e-06 56.2 77 46.8
TWI77G0228 Tripterygium wilfordii HOM05D000226 ORTHO05D000142 1.3e-06 56.2 81 45.7
AT5G17320 Arabidopsis thaliana HOM05D000226 ORTHO05D000142 1.7e-06 55.8 48 64.6
Duzib068G0073 Durio zibethinus HOM05D000226 ORTHO05D000142 1.7e-06 55.8 78 46.2
Duzib084G0044 Durio zibethinus HOM05D000226 ORTHO05D000142 1.7e-06 55.8 78 43.6
MD06G1236400 Malus domestica HOM05D000226 ORTHO05D000142 1.7e-06 55.8 57 52.6
Cpa.g.sc7.137 Carica papaya HOM05D000226 ORTHO05D000142 2.2e-06 55.5 60 50.0
Eucgr.F02903 Eucalyptus grandis HOM05D000226 ORTHO05D000142 2.2e-06 55.5 74 43.2
Potri.004G074800 Populus trichocarpa HOM05D000226 ORTHO05D000142 2.2e-06 55.5 59 50.8
Sabra15G0028300 Salix brachista HOM05D000226 ORTHO05D000142 2.2e-06 55.5 61 50.8
Gohir.D12G272900 Gossypium hirsutum HOM05D000226 ORTHO05D000142 2.9e-06 55.1 77 46.8
Gorai.008G293300 Gossypium raimondii HOM05D000226 ORTHO05D000142 2.9e-06 55.1 77 46.8
Lj3g0003643 Lotus japonicus HOM05D000226 ORTHO05D000142 2.9e-06 55.1 47 55.3
Rhsim10G0184000 Rhododendron simsii HOM05D000226 ORTHO05D000142 2.9e-06 55.1 77 44.2
Eucgr.H00609 Eucalyptus grandis HOM05D000226 ORTHO05D000142 3.7e-06 54.7 81 44.4
Gohir.A12G272100 Gossypium hirsutum HOM05D000226 ORTHO05D000142 3.7e-06 54.7 77 46.8
Atru.chr9.1572 Acer truncatum HOM05D000226 ORTHO05D000142 4.9e-06 54.3 83 44.6
ClCG04G012660 Citrullus lanatus HOM05D000226 ORTHO05D000142 4.9e-06 54.3 75 46.7
FvH4_5g18090 Fragaria vesca HOM05D000226 ORTHO05D000142 4.9e-06 54.3 62 48.4
FAN08G0376 Fragaria x ananassa HOM05D000226 ORTHO05D000142 4.9e-06 54.3 62 48.4
FAN13G1281 Fragaria x ananassa HOM05D000226 ORTHO05D000142 4.9e-06 54.3 62 48.4
FAN18G3808 Fragaria x ananassa HOM05D000226 ORTHO05D000142 4.9e-06 54.3 62 48.4
MBI19_g27699_MAGBIO Magnolia biondii HOM05D000226 ORTHO05D000142 4.9e-06 54.3 79 45.6
Sp3g02290 Schrenkiella parvula HOM05D000226 ORTHO05D000142 4.9e-06 54.3 50 62.0
Thecc.04G064800 Theobroma cacao HOM05D000226 ORTHO05D000142 4.9e-06 54.3 70 42.9
GSVIVG01035238001 Vitis vinifera HOM05D000226 ORTHO05D000142 4.9e-06 54.3 56 50.0
Aqoxy3G00008 Aquilegia oxysepala HOM05D000226 ORTHO05D000142 6.4e-06 53.9 59 50.8
Potri.017G144601 Populus trichocarpa HOM05D000226 ORTHO05D000142 6.4e-06 53.9 59 50.8
PGR004G0962 Punica granatum HOM05D000226 ORTHO05D000142 6.4e-06 53.9 66 48.5
Sed0013497 Sechium edule HOM05D000226 ORTHO05D000142 6.4e-06 53.9 75 45.3
THA.LOC104821159 Tarenaya hassleriana HOM05D000226 ORTHO05D000142 6.4e-06 53.9 48 62.5
CDE05G0529 Ceratophyllum demersum HOM05D000226 ORTHO05D000142 8.3e-06 53.5 65 47.7
Hma1.2p1_0034F.1_g021360 Hydrangea macrophylla HOM05D000226 ORTHO05D000142 8.3e-06 53.5 71 45.1
TAR629G1986 Trochodendron aralioides HOM05D000226 ORTHO05D000142 8.3e-06 53.5 75 49.3


User provided reference genes

Program Settings