Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 8.8e-27 123.2 80 100.0
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 7.2e-21 103.6 80 87.5
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 2.9e-14 81.6 82 79.3
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 8.8e-11 70.1 80 56.2
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 4.4e-10 67.8 80 63.8
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 7.5e-10 67.0 83 49.4
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 2.8e-09 65.1 86 46.5
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 3.7e-09 64.7 82 50.0
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 6.3e-09 63.9 80 48.8
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 6.3e-09 63.9 79 48.1
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 6.3e-09 63.9 79 48.1
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 8.2e-09 63.5 85 50.6
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.1e-08 63.2 83 50.6
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.4e-08 62.8 81 50.6
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 2.4e-08 62.0 80 47.5
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 3.1e-08 61.6 81 59.3
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 3.1e-08 61.6 81 48.1
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 4.1e-08 61.2 81 66.7
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 4.1e-08 61.2 86 60.5
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 5.3e-08 60.8 80 57.5
Glyma.06G293200 Glycine max HOM05D005953 ORTHO05D004056 5.3e-08 60.8 85 51.8
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 5.3e-08 60.8 85 45.9
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 5.3e-08 60.8 84 46.4
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 5.3e-08 60.8 84 44.0
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.0e-08 60.5 81 48.1
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 7.0e-08 60.5 81 48.1
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 7.0e-08 60.5 81 46.9
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 9.1e-08 60.1 84 47.6
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 9.1e-08 60.1 86 45.3
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 9.1e-08 60.1 84 45.2
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 9.1e-08 60.1 80 66.2
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.6e-07 59.3 84 58.3
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 3.5e-07 58.2 86 50.0
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.5e-07 58.2 86 46.5
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 3.5e-07 58.2 80 45.0
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.5e-07 58.2 80 46.2
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 4.5e-07 57.8 81 63.0
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 4.5e-07 57.8 80 48.8
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 5.9e-07 57.4 90 44.4
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 5.9e-07 57.4 87 46.0
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 7.7e-07 57.0 84 42.9
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 7.7e-07 57.0 87 49.4
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.3e-06 56.2 80 56.2
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 1.7e-06 55.8 81 50.6
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 1.7e-06 55.8 81 50.6
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 1.7e-06 55.8 80 41.2
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 1.7e-06 55.8 87 43.7
Peaxi162Scf00206g01011 Petunia axillaris HOM05D005953 ORTHO05D004056 1.7e-06 55.8 82 61.0
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 1.7e-06 55.8 81 48.1
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 1.7e-06 55.8 89 39.3
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 2.2e-06 55.5 86 48.8
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 2.2e-06 55.5 86 45.3
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 2.9e-06 55.1 87 44.8
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.8e-06 54.7 35 74.3
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 3.8e-06 54.7 82 45.1
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 3.8e-06 54.7 77 46.8
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 3.8e-06 54.7 80 45.0
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 3.8e-06 54.7 80 41.2
Nitab4.5_0002169g0120 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.8e-06 54.7 80 55.0
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 5.0e-06 54.3 81 51.9
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 5.0e-06 54.3 80 62.5
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 5.0e-06 54.3 50 54.0
Cpa.g.sc34.158 Carica papaya HOM05D005953 ORTHO05D043536 6.5e-06 53.9 29 86.2
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 6.5e-06 53.9 77 45.5
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 6.5e-06 53.9 53 56.6
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 6.5e-06 53.9 85 44.7
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 8.5e-06 53.5 83 55.4
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 8.5e-06 53.5 81 45.7


User provided reference genes

Program Settings