Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 4.0e-165 584.7 299 100.0
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 1.4e-109 400.2 296 75.3
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 4.9e-38 162.5 143 61.5
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 4.9e-30 136.0 146 54.8
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.1e-26 124.8 146 51.4
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.1e-26 124.8 146 51.4
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 8.1e-25 118.6 146 50.0
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 2.0e-23 114.0 147 47.6
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 2.6e-23 113.6 145 46.2
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 2.9e-22 110.2 148 45.3
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 9.2e-21 105.1 148 44.6
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 2.1e-20 104.0 142 44.4
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 6.0e-20 102.4 148 43.2
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 2.3e-19 100.5 149 43.0
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 6.6e-19 99.0 145 43.4
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 6.6e-19 99.0 145 45.5
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 1.1e-18 98.2 102 50.0
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.9e-18 97.4 160 38.1
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 4.3e-18 96.3 145 41.4
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 4.3e-18 96.3 145 41.4
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 1.6e-17 94.4 307 29.0
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.1e-17 94.0 128 42.2
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 6.2e-17 92.4 134 42.5
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 1.1e-16 91.7 146 41.8
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 3.1e-16 90.1 149 39.6
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 4.0e-16 89.7 142 43.7
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 4.0e-16 89.7 145 43.4
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 5.2e-16 89.4 148 41.9
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 6.8e-16 89.0 144 42.4
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 8.9e-16 88.6 144 41.7
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 2.0e-15 87.4 144 41.0
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 2.0e-15 87.4 160 36.9
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 2.6e-15 87.0 145 38.6
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.6e-15 87.0 144 41.0
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 3.4e-15 86.7 127 40.9
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 5.8e-15 85.9 144 40.3
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 9.9e-15 85.1 147 39.5
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.3e-14 84.7 128 44.5
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 1.3e-14 84.7 146 39.7
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 2.9e-14 83.6 144 39.6
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 3.8e-14 83.2 145 36.6
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 3.8e-14 83.2 151 39.1
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 3.2e-13 80.1 146 39.7
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 3.2e-13 80.1 144 39.6
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 4.2e-13 79.7 144 38.9
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 4.2e-13 79.7 146 36.3
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 1.2e-12 78.2 144 39.6
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 1.6e-12 77.8 146 41.1
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.6e-12 77.8 139 39.6
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 1.6e-12 77.8 148 35.8
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 2.7e-12 77.0 145 37.2
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 4.6e-12 76.3 144 40.3
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 4.6e-12 76.3 144 36.8
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 6.0e-12 75.9 146 33.6
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 6.0e-12 75.9 153 38.6
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.0e-11 75.1 142 37.3
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 1.0e-11 75.1 90 45.6
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 1.0e-11 75.1 297 28.3
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.0e-11 75.1 152 37.5
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.7e-11 74.3 92 45.7
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.3e-11 73.9 92 44.6
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 2.3e-11 73.9 144 36.1
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 3.9e-11 73.2 145 33.8
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 3.9e-11 73.2 92 44.6
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 6.6e-11 72.4 149 38.3
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 1.1e-10 71.6 151 36.4
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 1.5e-10 71.2 144 34.7
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.9e-10 70.9 144 34.7
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.9e-10 70.9 140 37.1
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.9e-10 70.9 152 32.2
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 3.3e-10 70.1 145 33.8
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 4.3e-10 69.7 156 33.3
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 5.6e-10 69.3 147 36.1
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 9.6e-10 68.6 144 34.0
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 2.8e-09 67.0 132 37.1
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 3.6e-09 66.6 89 41.6
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 3.6e-09 66.6 116 37.9
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 3.6e-09 66.6 131 36.6
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 4.8e-09 66.2 109 38.5
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 8.1e-09 65.5 156 32.1
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.1e-08 65.1 142 33.1
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.4e-08 64.7 150 31.3
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.4e-08 64.7 142 35.9
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 1.8e-08 64.3 148 34.5
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 2.4e-08 63.9 146 32.2
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.4e-08 63.9 138 36.2
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.1e-08 63.5 104 40.4
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 3.1e-08 63.5 144 33.3
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 3.1e-08 63.5 145 29.7
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 4.0e-08 63.2 132 37.9
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 5.3e-08 62.8 126 35.7
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 5.3e-08 62.8 136 33.8
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 9.0e-08 62.0 144 33.3
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 9.0e-08 62.0 89 44.9
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 1.5e-07 61.2 130 33.1
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 9.9e-07 58.5 148 32.4
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.2e-06 57.4 137 34.3
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.2e-06 57.4 137 34.3
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 3.8e-06 56.6 149 32.9
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 6.4e-06 55.8 145 29.7
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 8.4e-06 55.5 148 33.1


User provided reference genes

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