Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1213300 Malus domestica HOM05D004642 ORTHO05D005466 1.2e-65 253.1 133 100.0
MD09G1213800 Malus domestica HOM05D004642 ORTHO05D005466 6.3e-38 161.0 99 88.9
MD17G1195700 Malus domestica HOM05D004642 ORTHO05D005466 1.8e-37 159.5 109 81.7
Prupe.3G071700 Prunus persica HOM05D004642 ORTHO05D005466 1.1e-34 150.2 113 74.3
Duzib235G0715 Durio zibethinus HOM05D004642 ORTHO05D005466 3.5e-28 128.6 113 65.5
Potri.001G179600 Populus trichocarpa HOM05D004642 ORTHO05D005466 2.2e-27 125.9 108 64.8
CiPaw.02G151400 Carya illinoinensis HOM05D004642 ORTHO05D005466 2.5e-26 122.5 107 64.5
Glyma.11G187500 Glycine max HOM05D004642 ORTHO05D005466 5.5e-26 121.3 98 65.3
Sabra01G0147200 Salix brachista HOM05D004642 ORTHO05D005466 9.4e-26 120.6 116 60.3
Haze_16437 Corylus avellana HOM05D004642 ORTHO05D005466 4.7e-25 118.2 100 66.0
Glyma.11G237600 Glycine max HOM05D004642 ORTHO05D005466 1.0e-24 117.1 107 58.9
Cc04_g03480 Coffea canephora HOM05D004642 ORTHO05D005466 5.2e-24 114.8 99 61.6
Dinv30514 Davidia involucrata HOM05D004642 ORTHO05D005466 8.8e-24 114.0 99 64.6
TAR624G1258 Trochodendron aralioides HOM05D004642 ORTHO05D005466 6.3e-22 107.8 87 67.8
Sed0016916 Sechium edule HOM05D004642 ORTHO05D005466 5.4e-21 104.8 111 53.2
SGA_v2.0_scaffold37G14818 Striga asiatica HOM05D004642 ORTHO05D005466 5.4e-21 104.8 102 59.8
PSO782G0786 Papaver somniferum HOM05D004642 ORTHO05D005466 2.0e-20 102.8 106 50.9
Lalb_Chr14g0373421 Lupinus albus HOM05D004642 ORTHO05D005466 2.7e-20 102.4 99 58.6
Nitab4.5_0005851g0030 Nicotiana tabacum HOM05D004642 ORTHO05D005466 5.9e-20 101.3 110 50.9
Nn2g11790 Nelumbo nucifera HOM05D004642 ORTHO05D005466 1.0e-19 100.5 95 62.1
QL05p024308 Quercus lobata HOM05D004642 ORTHO05D005466 1.3e-19 100.1 107 56.1
Nn8g39228 Nelumbo nucifera HOM05D004642 ORTHO05D005466 1.7e-19 99.8 88 58.0
Actinidia08974 Actinidia chinensis HOM05D004642 ORTHO05D005466 5.0e-19 98.2 78 66.7
TAR626G0806 Trochodendron aralioides HOM05D004642 ORTHO05D005466 6.6e-19 97.8 78 70.5
PSO063G4770 Papaver somniferum HOM05D004642 ORTHO05D005466 3.3e-18 95.5 106 50.0
vmacro16950 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 5.5e-18 94.7 75 68.0
Cfa002061 Carpinus fangiana HOM05D004642 ORTHO05D005466 1.2e-17 93.6 78 65.4
AUR62016441 Chenopodium quinoa HOM05D004642 ORTHO05D005466 1.6e-17 93.2 108 47.2
ATR0037G055 Amborella trichopoda HOM05D004642 ORTHO05D005466 2.1e-17 92.8 89 56.2
vmacro18915 Vaccinium macrocarpon HOM05D004642 ORTHO05D005466 2.1e-17 92.8 88 56.8
Thecc.06G086400 Theobroma cacao HOM05D004642 ORTHO05D005466 4.7e-17 91.7 70 74.3
CSS0030593 Camellia sinensis var. sinensis HOM05D004642 ORTHO05D005466 2.3e-16 89.4 60 78.3
Rhsim12G0197600 Rhododendron simsii HOM05D004642 ORTHO05D005466 8.9e-16 87.4 70 65.7
Rhsim08G0221000 Rhododendron simsii HOM05D004642 ORTHO05D005466 1.5e-15 86.7 75 64.0
Hund06610 Selenicereus undatus HOM05D004642 ORTHO05D005466 1.5e-15 86.7 108 42.6
Ah.01g021290 Amaranthus hybridus HOM05D004642 ORTHO05D005466 3.4e-15 85.5 105 42.9
TPR.G15588 Trifolium pratense HOM05D004642 ORTHO05D005466 4.4e-15 85.1 71 70.4
Zm00001eb283760 Zea mays HOM05D004642 ORTHO05D005466 2.2e-14 82.8 107 47.7
Ciclev10025273m.g Citrus clementina HOM05D004642 ORTHO05D005466 4.9e-14 81.6 79 60.8
AUR62011627 Chenopodium quinoa HOM05D004642 ORTHO05D005466 8.3e-14 80.9 108 41.7
Sc21g0005100 Simmondsia chinensis HOM05D004642 ORTHO05D005466 1.1e-13 80.5 70 65.7
BcaC09g48580 Brassica carinata HOM05D004642 ORTHO05D005466 2.4e-13 79.3 90 51.1
AL776U10010 Arabidopsis lyrata HOM05D004642 ORTHO05D005466 3.5e-12 75.5 78 60.3
CDE07G0399 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 3.5e-12 75.5 91 45.1
Lj5A61G44 Lonicera japonica HOM05D004642 ORTHO05D005466 3.5e-12 75.5 54 72.2
unitig_578.g16688 Utricularia gibba HOM05D004642 ORTHO05D005466 1.7e-11 73.2 92 44.6
Migut.D01034 Erythranthe guttata HOM05D004642 ORTHO05D005466 5.0e-11 71.6 50 74.0
HPP92_020045 Vanilla planifolia HOM05D004642 ORTHO05D005466 6.6e-11 71.2 65 56.9
CiPaw.01G239700 Carya illinoinensis HOM05D004642 ORTHO05D005466 4.3e-10 68.6 48 75.0
Peaxi162Scf00015g00335 Petunia axillaris HOM05D004642 ORTHO05D005466 5.6e-10 68.2 100 43.0
FvH4_6g31081 Fragaria vesca HOM05D004642 ORTHO05D005466 1.2e-09 67.0 53 67.9
FAN14G2337 Fragaria x ananassa HOM05D004642 ORTHO05D005466 1.2e-09 67.0 53 67.9
SEGI_16798 Sequoiadendron giganteum HOM05D004642 ORTHO05D005466 1.2e-09 67.0 84 48.8
A03p54580 Brassica napus HOM05D004642 ORTHO05D005466 2.8e-09 65.9 66 60.6
BraA03t14525Z Brassica rapa HOM05D004642 ORTHO05D005466 2.8e-09 65.9 66 60.6
CDE07G1358 Ceratophyllum demersum HOM05D004642 ORTHO05D005466 3.6e-09 65.5 118 34.7
HanXRQChr16g0500971 Helianthus annuus HOM05D004642 ORTHO05D005466 4.7e-09 65.1 109 36.7
FAN09G1651 Fragaria x ananassa HOM05D004642 ORTHO05D005466 6.1e-09 64.7 43 76.7
Os05g0180400 Oryza sativa ssp. japonica HOM05D004642 ORTHO05D005466 1.4e-08 63.5 89 43.8
unitig_744.g24335 Utricularia gibba HOM05D004642 ORTHO05D005466 1.4e-08 63.5 96 40.6
FAN05G5776 Fragaria x ananassa HOM05D004642 ORTHO05D005466 2.3e-08 62.8 43 74.4
Sopen03g039110 Solanum pennellii HOM05D004642 ORTHO05D005466 2.3e-08 62.8 110 38.2
PGSC0003DMG400002564 Solanum tuberosum HOM05D004642 ORTHO05D005466 2.3e-08 62.8 110 38.2
TAR636G1625 Trochodendron aralioides HOM05D004642 ORTHO05D005466 2.3e-08 62.8 83 48.2
ECA248G0988 Erigeron canadensis HOM05D004642 ORTHO05D005466 5.2e-08 61.6 46 65.2
Solyc03g120230.3 Solanum lycopersicum HOM05D004642 ORTHO05D005466 8.9e-08 60.8 110 40.0
A01p38100 Brassica napus HOM05D015723 ORTHO05D003275 2.0e-07 59.7 109 37.6
Ca_19383_v3 Cicer arietinum L. HOM05D004642 ORTHO05D005466 2.6e-07 59.3 50 68.0
Lsat_1_v5_gn_4_103580 Lactuca sativa HOM05D004642 ORTHO05D005466 2.6e-07 59.3 47 57.4
Hund00614 Selenicereus undatus HOM05D004642 ORTHO05D005466 2.6e-07 59.3 116 36.2
RcHm_v2.0_Chr2g0137781 Rosa chinensis HOM05D004642 ORTHO05D005466 7.5e-07 57.8 47 70.2
Aqoxy7G01787 Aquilegia oxysepala HOM05D004642 ORTHO05D005466 2.2e-06 56.2 90 45.6
Atru.chr1.3266 Acer truncatum HOM05D004642 ORTHO05D005466 2.9e-06 55.8 46 69.6
Eucgr.F03012 Eucalyptus grandis HOM05D004642 ORTHO05D005466 3.7e-06 55.5 46 60.9
Hma1.2p1_0323F.1_g125210 Hydrangea macrophylla HOM05D004642 ORTHO05D005466 3.7e-06 55.5 49 67.3
Lj3g0008789 Lotus japonicus HOM05D004642 ORTHO05D005466 8.3e-06 54.3 101 38.6


User provided reference genes

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