Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 8.2e-277 956.4 488 100.0
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 5.0e-226 787.7 489 82.4
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 3.0e-186 655.6 497 70.4
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 4.4e-129 465.7 499 56.1
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 3.7e-128 462.6 514 53.7
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 3.2e-119 433.0 514 51.0
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 3.0e-117 426.4 521 50.5
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 6.6e-117 425.2 498 52.6
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 7.3e-116 421.8 498 52.4
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 1.2e-115 421.0 497 51.9
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 8.9e-114 414.8 516 50.2
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 9.8e-113 411.4 428 55.1
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 3.2e-111 406.4 517 50.3
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 1.2e-110 404.4 518 51.5
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 6.0e-110 402.1 515 49.9
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 3.9e-109 399.4 498 51.6
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 2.8e-107 393.3 512 50.2
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 4.0e-106 389.4 499 49.1
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 5.2e-106 389.0 499 49.7
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 3.2e-103 379.8 502 49.4
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 2.7e-102 376.7 514 48.4
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 6.0e-102 375.6 486 49.4
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 1.3e-101 374.4 516 47.3
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 3.0e-101 373.2 525 45.9
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 1.5e-100 370.9 516 48.3
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 2.5e-100 370.2 515 47.6
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 4.3e-100 369.4 516 48.1
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 7.3e-100 368.6 515 46.4
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 2.0e-97 360.5 514 45.5
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 5.8e-97 359.0 517 45.6
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 4.9e-96 355.9 506 45.8
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 8.4e-96 355.1 518 46.7
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 1.2e-94 351.3 476 47.5
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 1.0e-93 348.2 517 44.7
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 3.9e-93 346.3 517 44.7
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.2e-89 334.7 515 44.3
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 5.8e-89 332.4 456 47.6
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 7.6e-89 332.0 530 46.2
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 1.7e-88 330.9 444 47.1
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 6.4e-88 328.9 523 44.4
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 1.3e-85 321.2 460 46.1
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 1.5e-84 317.8 490 43.9
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 3.3e-84 316.6 453 47.7
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 7.3e-84 315.5 557 42.0
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 1.3e-83 314.7 460 46.3
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 1.3e-83 314.7 523 43.8
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 1.6e-83 314.3 418 46.9
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 6.2e-83 312.4 566 40.5
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 1.9e-79 300.8 508 41.7
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 5.4e-79 299.3 446 44.8
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 3.5e-78 296.6 522 40.6
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 6.7e-77 292.4 502 40.8
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 3.3e-76 290.0 444 43.7
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 3.3e-76 290.0 444 43.7
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 5.6e-76 289.3 519 40.1
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 1.4e-74 284.6 524 41.4
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 1.4e-74 284.6 443 42.0
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 1.4e-74 284.6 508 40.4
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 3.1e-74 283.5 524 41.0
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 2.9e-72 276.9 518 38.2
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 1.1e-71 275.0 534 38.0
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 2.4e-71 273.9 488 40.8
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 4.6e-70 269.6 523 37.1
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 4.6e-70 269.6 517 38.9
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 4.6e-70 269.6 428 43.7
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 3.0e-69 266.9 508 39.0
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 6.7e-69 265.8 526 38.0
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 1.1e-68 265.0 515 37.7
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 1.9e-68 264.2 467 42.0
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 3.3e-68 263.5 546 37.0
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 7.4e-68 262.3 438 40.6
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 1.6e-67 261.2 434 41.2
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 3.1e-66 256.9 505 38.6
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.0e-64 251.9 443 40.4
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 1.0e-64 251.9 469 39.2
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 6.5e-64 249.2 426 41.8
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 1.9e-63 247.7 520 35.6
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 2.7e-62 243.8 516 36.2
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 4.8e-59 233.0 512 36.5
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 1.1e-58 231.9 474 36.7
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.4e-58 231.5 537 35.8
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 3.1e-58 230.3 459 38.8
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 4.1e-58 229.9 562 34.2
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 1.5e-57 228.0 512 35.0
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 2.6e-57 227.3 458 36.5
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 1.3e-56 224.9 457 35.9
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 2.2e-56 224.2 562 33.6
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 5.0e-56 223.0 534 35.0
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 1.4e-55 221.5 376 40.7
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.4e-55 221.5 487 35.1
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 1.9e-55 221.1 514 34.6
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 3.2e-55 220.3 529 33.5
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 5.5e-55 219.5 487 34.9
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 7.2e-55 219.2 457 36.3
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 2.1e-54 217.6 471 35.2
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 7.9e-54 215.7 469 35.4
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 1.6e-51 208.0 456 35.3
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 2.4e-50 204.1 493 36.7
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 1.2e-49 201.8 462 34.8
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 4.5e-49 199.9 446 34.8
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 4.5e-49 199.9 446 34.8
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 4.5e-49 199.9 446 34.8
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 3.2e-47 193.7 464 35.6
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 2.0e-44 184.5 247 48.2
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 3.9e-37 160.2 477 30.4
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 1.3e-32 145.2 306 35.6
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 2.7e-30 137.5 257 37.7
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 2.3e-29 134.4 407 32.2
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 1.8e-21 108.2 516 27.7
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 2.3e-21 107.8 223 37.2
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 7.0e-18 96.3 143 42.0
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 1.1e-15 89.0 146 39.0
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 2.0e-12 78.2 282 30.1
CDE04G1568 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.6e-06 58.5 73 45.2
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.8e-06 57.8 66 51.5


User provided reference genes

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