Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 0.0e+00 2259.2 1230 100.0
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 0.0e+00 1725.3 1245 80.0
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 0.0e+00 1598.6 1247 75.1
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 0.0e+00 1369.8 1250 67.2
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 0.0e+00 1336.2 1246 66.1
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 0.0e+00 1330.5 1245 66.3
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 0.0e+00 1323.1 1246 66.0
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 0.0e+00 1317.4 1246 65.8
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 0.0e+00 1234.9 1392 58.1
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 0.0e+00 1102.0 1280 57.7
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 6.2e-305 1051.2 1253 56.1
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 1.8e-304 1049.7 1201 57.4
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 1.6e-297 1026.5 1245 55.6
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 4.6e-284 981.9 1224 52.7
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 9.9e-279 964.1 1251 53.9
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 7.9e-276 954.5 1239 52.4
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 3.4e-271 939.1 1201 53.6
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 9.3e-269 931.0 1208 52.8
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 3.8e-262 909.1 1239 50.9
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 1.8e-259 900.2 1198 52.4
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 5.7e-258 895.2 1239 50.8
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 2.4e-256 889.8 1249 51.1
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 2.9e-254 882.9 1251 50.6
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 2.9e-254 882.9 1217 51.3
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 5.0e-254 882.1 1218 51.1
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 9.3e-253 877.9 1236 50.3
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 3.5e-252 875.9 1238 50.3
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 1.0e-251 874.4 1216 51.2
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 4.1e-248 862.4 1257 49.2
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 6.9e-248 861.7 1228 49.8
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 2.0e-247 860.1 1258 50.3
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 2.1e-244 850.1 1254 50.0
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 1.5e-242 844.0 1253 49.8
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 5.3e-240 835.5 1221 49.5
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 3.4e-239 832.8 1228 49.1
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 4.5e-239 832.4 1257 48.2
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 5.9e-239 832.0 1260 48.7
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.5e-237 825.5 1217 48.7
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 7.9e-236 821.6 1253 49.2
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 2.6e-234 816.6 1251 49.1
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 5.3e-232 808.9 1261 48.5
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 5.0e-230 802.4 1244 48.3
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 1.6e-228 797.3 1231 48.2
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 3.0e-227 793.1 1245 45.5
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 1.1e-226 791.2 1247 46.8
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 1.2e-223 781.2 1162 49.5
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 1.5e-221 774.2 1258 47.7
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 6.1e-220 768.8 1230 47.2
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 4.0e-219 766.1 1242 46.3
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 2.2e-217 760.4 1253 45.8
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 1.2e-212 744.6 1234 41.9
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 6.6e-206 722.2 1300 45.7
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.0e-203 713.4 1071 50.8
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 2.7e-199 700.3 1184 45.6
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 9.5e-197 691.8 1265 44.5
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 2.0e-194 684.1 1239 44.6
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 3.9e-190 669.8 1257 45.0
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 9.2e-184 648.7 1201 44.4
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 5.6e-181 639.4 1262 43.6
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 5.6e-181 639.4 1266 44.4
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 2.1e-180 637.5 1296 40.1
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 3.1e-179 633.6 1054 45.7
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 1.2e-178 631.7 1255 43.8
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 2.0e-178 630.9 1232 43.6
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 2.1e-175 620.9 1118 44.6
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 3.0e-174 617.1 1188 44.0
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 3.9e-174 616.7 1259 42.0
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 8.9e-171 605.5 1291 39.9
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 2.7e-167 594.0 854 52.7
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 1.7e-161 574.7 1179 42.2
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 5.4e-160 569.7 1231 42.1
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 2.7e-159 567.4 1245 40.0
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 5.8e-154 549.7 1222 37.8
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 5.5e-152 543.1 1217 40.1
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 3.0e-150 537.3 1026 43.8
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.1e-149 535.4 1204 37.4
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 2.5e-149 534.3 1215 39.8
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 6.9e-147 526.2 1278 39.3
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 2.2e-145 521.2 1226 37.2
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 5.5e-144 516.5 1233 38.8
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 9.3e-144 515.8 575 54.1
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 1.2e-143 515.4 1238 40.0
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 7.9e-143 512.7 1224 39.9
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 1.3e-137 495.4 1215 37.9
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 2.1e-135 488.0 1207 38.5
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 1.8e-131 474.9 1145 39.9
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 9.1e-131 472.6 1225 38.0
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 2.7e-127 461.1 1038 37.9
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 1.0e-126 459.1 1255 37.1
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 6.7e-126 456.4 1192 38.5
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 1.1e-125 455.7 1180 37.1
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 1.1e-125 455.7 1180 37.1
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 7.4e-125 453.0 1222 36.5
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 1.1e-123 449.1 1181 36.7
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.2e-122 445.7 1180 36.5
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 1.7e-121 441.8 1259 36.3
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.2e-121 441.4 1260 36.7
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 6.5e-121 439.9 1257 34.1
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 4.8e-116 423.7 910 37.9
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 1.0e-102 379.4 739 39.1
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 1.3e-100 372.5 1243 35.5
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 2.8e-100 371.3 1224 34.8
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 2.5e-96 358.2 1064 32.0
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 3.2e-96 357.8 1315 33.7
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 5.5e-96 357.1 1281 34.0
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 8.0e-95 353.2 1035 37.6
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 2.4e-83 315.1 1343 31.9
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 7.8e-82 310.1 1196 32.1
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.8e-78 298.9 435 46.2
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 2.0e-77 295.4 503 43.7
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 2.9e-76 291.6 1106 34.3
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 2.0e-74 285.4 1116 31.3
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 7.8e-74 283.5 325 54.2
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 4.3e-72 277.7 1313 31.2
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 1.1e-62 246.5 325 50.8
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 3.2e-59 235.0 1040 32.7
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 5.2e-54 217.6 250 53.6
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 7.1e-51 207.2 698 29.8
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 1.2e-45 189.9 179 57.0
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 2.7e-42 178.7 667 30.0
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 4.6e-42 177.9 209 53.1
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 8.7e-41 173.7 463 33.7
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 2.1e-39 169.1 441 33.8
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 2.1e-34 152.5 1329 26.3
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 2.1e-34 152.5 240 47.9
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 3.9e-33 148.3 122 62.3
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 3.3e-32 145.2 131 58.8
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 3.4e-29 135.2 464 28.0
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 5.8e-29 134.4 175 46.3
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 5.5e-27 127.9 103 60.2
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 9.3e-27 127.1 191 42.4
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 2.7e-26 125.6 157 45.2
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 4.5e-21 108.2 61 78.7
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 1.7e-20 106.3 147 44.2
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 1.0e-17 97.1 88 63.6
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 2.3e-17 95.9 163 39.9
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 1.7e-15 89.7 106 46.2
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 1.1e-14 87.0 161 40.4
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 4.1e-14 85.1 130 50.8
SHI11163 Sapria himalayana HOM05D004845 ORTHO05D005957 3.8e-12 78.6 70 58.6
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 6.5e-12 77.8 123 51.2
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 2.5e-11 75.9 52 63.5
Oeu022974.1 Olea europaea HOM05D005435 ORTHO05D007370 5.5e-11 74.7 190 36.3
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 8.8e-09 67.4 216 31.0
BolC1t04239H Brassica oleracea HOM05D004845 ORTHO05D005957 3.3e-08 65.5 134 38.1
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 5.7e-08 64.7 716 29.6
BolC1t04238H Brassica oleracea HOM05D004845 ORTHO05D005957 2.8e-07 62.4 55 56.4


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