Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 2.6e-245 851.7 439 100.0
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 2.2e-180 636.0 358 91.3
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 1.7e-156 556.6 440 66.4
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 6.7e-129 464.9 439 57.6
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.0e-125 453.4 439 56.0
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 2.6e-125 453.0 439 56.0
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.0e-124 451.1 439 55.6
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.2e-123 445.7 439 55.6
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 8.8e-121 438.0 475 52.0
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 7.5e-120 434.9 437 54.2
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 3.1e-118 429.5 441 54.0
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 2.7e-117 426.4 403 54.3
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 9.4e-115 417.9 394 56.9
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 6.1e-114 415.2 441 53.1
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 6.1e-114 415.2 439 52.8
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 4.4e-112 409.1 406 53.9
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 9.8e-112 407.9 439 52.8
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 3.7e-111 406.0 400 53.5
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 4.8e-111 405.6 397 56.2
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 2.4e-110 403.3 440 51.4
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 5.4e-110 402.1 427 50.8
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 4.5e-109 399.1 389 54.2
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 8.6e-108 394.8 403 53.8
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 8.6e-108 394.8 417 51.8
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 4.2e-107 392.5 424 51.7
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 7.2e-107 391.7 399 50.4
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 1.6e-106 390.6 394 51.0
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 6.1e-106 388.7 414 50.0
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 8.0e-106 388.3 394 52.8
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 1.8e-105 387.1 417 49.4
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 8.9e-105 384.8 393 51.7
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 2.6e-104 383.3 435 51.7
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 4.4e-104 382.5 442 48.4
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 4.9e-103 379.0 395 51.1
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 1.1e-102 377.9 397 51.4
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 1.4e-102 377.5 393 51.4
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.8e-102 377.1 399 51.1
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 5.4e-102 375.6 403 51.1
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 3.5e-101 372.9 481 46.8
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 4.5e-101 372.5 441 48.5
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 1.3e-100 370.9 391 50.4
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 2.9e-100 369.8 385 50.6
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 2.9e-100 369.8 413 49.6
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 5.0e-100 369.0 398 49.7
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 7.3e-99 365.2 392 51.3
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 7.3e-99 365.2 393 48.9
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 2.1e-98 363.6 393 50.1
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 2.1e-98 363.6 392 48.2
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 2.8e-98 363.2 394 51.3
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 3.6e-98 362.8 400 49.0
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 1.8e-97 360.5 436 45.9
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 2.3e-97 360.1 436 45.9
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 6.8e-97 358.6 412 48.5
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 1.5e-96 357.5 358 52.8
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 2.0e-96 357.1 403 47.9
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 3.4e-96 356.3 403 48.6
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 3.4e-96 356.3 351 53.0
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 5.8e-96 355.5 394 48.0
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 5.8e-96 355.5 442 45.2
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 9.8e-96 354.8 394 47.7
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 1.7e-95 354.0 405 48.9
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 1.1e-94 351.3 434 45.2
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 1.9e-94 350.5 392 49.0
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 2.4e-94 350.1 430 44.9
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 4.1e-94 349.4 398 46.7
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 5.4e-94 349.0 430 44.4
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 7.0e-94 348.6 442 45.5
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 3.5e-93 346.3 392 47.7
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 7.8e-93 345.1 383 48.0
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 7.8e-93 345.1 400 49.8
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 6.6e-92 342.0 398 47.0
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 1.1e-91 341.3 400 47.2
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 5.6e-91 339.0 389 46.3
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 3.1e-89 333.2 392 46.9
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 4.0e-89 332.8 399 45.9
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 2.6e-88 330.1 392 46.2
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 2.2e-87 327.0 437 43.7
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 4.1e-86 322.8 398 45.5
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.2e-85 321.2 396 43.2
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 1.6e-85 320.9 391 45.3
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 1.6e-85 320.9 655 35.1
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 2.1e-85 320.5 391 46.3
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 2.7e-85 320.1 408 44.4
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 3.5e-85 319.7 429 45.7
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 3.5e-85 319.7 396 44.7
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 1.0e-84 318.2 438 43.2
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 1.3e-84 317.8 392 43.6
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 1.7e-84 317.4 395 46.1
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 1.7e-84 317.4 395 46.1
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 1.7e-84 317.4 395 46.1
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 5.1e-84 315.8 420 43.1
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 8.6e-84 315.1 399 45.6
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 1.1e-83 314.7 318 52.5
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 2.5e-83 313.5 406 43.1
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 3.3e-83 313.2 399 43.1
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 5.6e-83 312.4 445 40.7
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 7.3e-83 312.0 427 42.2
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 1.2e-82 311.2 400 41.8
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.6e-82 310.8 509 39.7
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 1.1e-81 308.1 431 41.8
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 2.6e-80 303.5 419 41.5
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 1.3e-79 301.2 431 41.3
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 1.7e-79 300.8 396 41.9
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 2.2e-79 300.4 422 39.6
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.4e-79 298.9 386 45.6
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 1.1e-78 298.1 402 43.8
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 5.4e-78 295.8 400 43.8
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 2.1e-77 293.9 300 54.0
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 9.3e-70 268.5 400 39.8
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.6e-69 267.7 404 39.9
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 3.9e-68 263.1 248 54.4
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 5.1e-68 262.7 392 40.1
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 1.4e-62 244.6 392 38.5
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 1.6e-61 241.1 392 39.0
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 6.0e-61 239.2 421 37.5
Ca_27339_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 1.1e-59 235.0 281 48.0
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 4.0e-57 226.5 409 37.2
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.9e-57 225.7 376 40.2
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 3.4e-56 223.4 225 52.0
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 8.1e-50 202.2 238 46.6
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 1.3e-47 194.9 394 34.5
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 4.2e-46 189.9 440 32.7
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 2.1e-45 187.6 438 31.7
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 3.5e-45 186.8 233 45.5
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 3.5e-45 186.8 401 35.9
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 7.9e-45 185.7 209 48.3
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.0e-44 185.3 396 34.8
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 2.3e-44 184.1 402 36.6
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 6.7e-44 182.6 316 37.0
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 5.7e-43 179.5 403 36.0
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 2.3e-36 157.5 239 38.5
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.9e-35 154.5 290 35.5
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 2.5e-35 154.1 323 35.0
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 3.3e-35 153.7 238 39.5
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.5e-32 144.8 243 38.7
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.7e-31 141.4 136 54.4
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 2.0e-27 127.9 341 29.0
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 3.1e-25 120.6 461 25.2
Haze_06394 Corylus avellana HOM05D004436 ORTHO05D005179 5.3e-25 119.8 188 43.1
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 8.5e-23 112.5 152 42.8
TPR.G16496 Trifolium pratense HOM05D004436 ORTHO05D005179 7.9e-21 105.9 179 36.9
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 3.9e-20 103.6 112 50.0
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 1.5e-19 101.7 137 42.3
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 8.2e-18 95.9 154 36.4
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.2e-16 92.0 170 37.6
Aqoxy2G02915 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.5e-14 85.1 131 35.9
FAN14G1374 Fragaria x ananassa HOM05D004436 ORTHO05D005179 7.2e-14 82.8 150 38.0
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 8.0e-13 79.3 111 42.3
Psat6g077080 Pisum sativum HOM05D001891 ORTHO05D005832 5.2e-12 76.6 112 39.3
Psat6g077120 Pisum sativum HOM05D001891 ORTHO05D005832 5.2e-12 76.6 112 39.3
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 2.6e-11 74.3 94 44.7
SEGI_36774 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.4e-09 68.6 120 32.5
FAN05G3968 Fragaria x ananassa HOM05D004436 ORTHO05D005179 2.7e-08 64.3 83 47.0
Ca_02098_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 7.7e-08 62.8 175 29.1
PSO017G0055 Papaver somniferum HOM05D004436 ORTHO05D005179 7.7e-08 62.8 123 35.0
SMO144G0124 Selaginella moellendorffii HOM05D004436 ORTHO05D005179 3.8e-07 60.5 90 40.0
Oeu027301.1 Olea europaea HOM05D004436 ORTHO05D005179 5.0e-07 60.1 137 34.3
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 8.5e-07 59.3 170 27.1
Cre01.g070567 Chlamydomonas reinhardtii HOM05D004436 ORTHO05D005179 9.4e-06 55.8 166 27.1


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