Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 8.6e-193 676.8 334 100.0
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 2.5e-139 499.2 339 76.4
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 8.2e-127 457.6 344 66.3
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 6.9e-126 454.5 294 78.6
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 1.7e-124 449.9 328 69.8
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 1.9e-123 446.4 337 67.7
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 2.5e-123 446.0 343 66.2
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 2.3e-121 439.5 365 64.4
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 2.3e-121 439.5 343 65.0
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 3.7e-119 432.2 336 64.6
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 3.7e-119 432.2 344 65.7
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.2e-119 431.0 360 65.6
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.2e-119 431.0 360 65.6
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.8e-118 429.9 350 62.9
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 9.1e-118 427.6 316 67.4
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 2.9e-116 422.5 348 61.8
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 2.9e-116 422.5 316 66.1
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 5.0e-116 421.8 395 60.0
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.1e-115 420.6 316 65.8
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 3.2e-115 419.1 344 61.6
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.2e-114 417.2 329 62.9
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 2.7e-114 416.0 340 61.2
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.0e-113 414.1 336 62.2
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 2.3e-113 412.9 345 60.6
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 2.0e-112 409.8 342 62.3
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.4e-112 408.7 356 58.1
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 3.1e-110 402.5 331 61.9
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 9.1e-110 401.0 334 61.1
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 2.0e-109 399.8 334 61.7
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 4.5e-109 398.7 326 62.9
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 4.5e-109 398.7 320 63.4
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 7.7e-109 397.9 270 68.9
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.0e-108 397.5 340 59.7
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.0e-108 397.5 355 58.9
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 2.2e-108 396.4 323 60.7
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.8e-108 395.6 326 59.8
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 6.5e-108 394.8 345 58.8
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 8.5e-108 394.4 355 58.9
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 2.5e-107 392.9 331 60.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 4.2e-107 392.1 332 61.1
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 1.2e-106 390.6 331 59.8
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 2.1e-106 389.8 330 60.6
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 2.7e-106 389.4 344 60.8
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 6.7e-105 384.8 346 59.8
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 2.0e-104 383.3 350 57.1
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 3.3e-104 382.5 350 57.1
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 9.7e-104 380.9 347 58.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 4.8e-103 378.6 264 67.0
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 4.8e-103 378.6 335 55.8
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 1.1e-102 377.5 307 61.2
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 1.1e-102 377.5 264 66.3
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 9.1e-102 374.4 341 56.3
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 2.2e-100 369.8 230 75.2
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 2.2e-100 369.8 339 57.5
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 6.5e-100 368.2 347 56.8
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 1.5e-99 367.1 245 68.6
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 2.5e-99 366.3 347 55.3
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 4.2e-99 365.5 262 64.1
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 5.5e-99 365.2 325 56.0
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 9.4e-99 364.4 326 55.5
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 9.4e-99 364.4 326 55.5
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 3.6e-98 362.5 333 54.7
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 6.1e-98 361.7 349 54.4
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 6.1e-98 361.7 332 54.5
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 6.1e-98 361.7 334 55.4
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 8.0e-98 361.3 330 54.5
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 1.0e-97 360.9 318 56.3
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.4e-97 360.5 428 49.1
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.0e-97 359.4 298 60.4
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.0e-97 359.0 348 54.3
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 6.8e-97 358.2 321 54.8
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 2.0e-96 356.7 335 56.7
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 4.4e-96 355.5 323 55.7
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 4.4e-96 355.5 341 53.7
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 7.5e-96 354.8 232 68.1
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.2e-95 353.2 323 54.2
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 3.5e-93 345.9 338 55.9
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 4.5e-93 345.5 241 74.7
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 7.7e-93 344.7 324 54.3
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.3e-92 344.0 327 55.0
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 6.5e-92 341.7 277 59.2
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 9.4e-91 337.8 220 68.2
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 9.4e-91 337.8 324 53.1
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 1.4e-89 334.0 353 52.1
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.0e-89 332.4 239 72.8
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 7.0e-86 321.6 211 70.1
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.3e-84 317.4 316 52.2
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.9e-84 316.2 210 71.4
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 5.0e-84 315.5 231 64.9
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 1.0e-81 307.8 337 51.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.4e-78 297.4 198 68.2
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 4.6e-77 292.4 259 59.5
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 5.9e-77 292.0 248 61.7
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 7.8e-77 291.6 174 78.7
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.1e-75 287.7 277 58.8
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 2.8e-74 283.1 267 55.8
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 2.0e-72 276.9 221 56.1
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 3.4e-72 276.2 269 53.5
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 1.1e-70 271.2 277 50.5
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 2.7e-69 266.5 290 49.0
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 2.5e-67 260.0 283 45.6
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 3.3e-67 259.6 219 54.8
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 7.5e-64 248.4 226 51.8
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 1.7e-47 194.1 246 41.9
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 7.3e-43 178.7 209 43.1
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.5e-40 169.5 108 75.9
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.5e-40 169.5 108 76.9
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 4.9e-39 166.0 194 45.9
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 5.6e-35 152.5 118 59.3
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.1e-27 128.3 97 63.9
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 3.0e-20 103.6 167 40.1
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 2.5e-14 84.0 133 42.1
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 3.2e-14 83.6 47 74.5
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 3.7e-10 70.1 221 27.6
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 1.4e-09 68.2 50 68.0
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 1.7e-07 61.2 90 35.6
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 2.2e-07 60.8 139 32.4
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 2.9e-07 60.5 139 32.4


User provided reference genes

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