Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 1.7e-93 345.9 167 100.0
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.3e-72 276.6 165 81.8
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.0e-69 266.9 159 81.8
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 3.0e-69 265.4 159 81.1
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 5.1e-69 264.6 159 79.2
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.6e-67 259.6 159 81.1
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.4e-63 246.5 160 71.2
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 3.0e-61 238.8 166 69.3
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 4.3e-60 235.0 157 71.3
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 5.6e-60 234.6 167 70.7
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 4.8e-59 231.5 166 69.9
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.1e-58 228.8 154 66.9
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.1e-58 228.8 154 66.9
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.1e-58 228.8 154 66.9
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 3.1e-58 228.8 159 71.1
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 4.0e-58 228.4 161 70.2
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 6.9e-58 227.6 149 72.5
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 1.7e-56 223.0 161 67.1
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 6.4e-56 221.1 160 66.9
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.1e-55 220.3 154 64.9
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 4.2e-55 218.4 161 65.2
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 4.2e-55 218.4 159 68.6
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 4.2e-55 218.4 160 66.2
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.2e-54 216.9 159 67.9
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 2.7e-54 215.7 230 50.9
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 2.7e-54 215.7 163 67.5
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 6.0e-54 214.5 147 69.4
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 6.0e-54 214.5 160 63.8
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 1.0e-53 213.8 168 63.7
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 1.3e-53 213.4 161 65.2
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 1.3e-53 213.4 160 66.2
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 3.0e-53 212.2 160 65.0
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 5.1e-53 211.5 145 71.7
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 5.1e-53 211.5 164 64.0
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 5.6e-52 208.0 142 71.1
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 5.6e-52 208.0 154 66.9
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 7.4e-52 207.6 163 64.4
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 3.7e-51 205.3 147 69.4
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 8.2e-51 204.1 162 63.6
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.1e-50 203.8 160 63.8
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.4e-50 203.4 154 64.3
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 3.1e-50 202.2 163 62.6
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 5.3e-50 201.4 152 65.8
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 1.2e-49 200.3 160 61.2
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.2e-49 200.3 162 59.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.5e-49 199.9 165 61.2
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 3.4e-49 198.7 148 62.2
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 3.4e-49 198.7 148 62.2
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 3.4e-49 198.7 148 64.9
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 7.6e-49 197.6 148 61.5
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.0e-48 197.2 176 60.8
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 1.0e-48 197.2 163 60.7
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.0e-48 197.2 165 61.2
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 1.0e-48 197.2 148 64.2
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.3e-48 196.8 148 65.5
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 2.2e-48 196.1 154 59.1
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 6.5e-48 194.5 135 67.4
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 6.5e-48 194.5 160 60.0
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 8.4e-48 194.1 162 63.6
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 5.5e-47 191.4 148 60.8
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.2e-46 190.3 160 59.4
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 3.5e-46 188.7 148 59.5
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.8e-45 186.4 135 62.2
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.3e-45 186.0 135 62.2
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 6.7e-45 184.5 133 65.4
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 1.1e-44 183.7 214 50.0
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.1e-44 183.7 145 60.7
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.1e-44 183.7 149 59.7
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.9e-44 183.0 150 60.0
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 5.7e-44 181.4 135 59.3
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.7e-44 181.4 154 56.5
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 7.4e-44 181.0 145 56.6
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 2.2e-43 179.5 135 59.3
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 2.2e-43 179.5 148 61.5
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 4.8e-43 178.3 158 58.9
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 3.1e-42 175.6 145 60.7
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 5.3e-42 174.9 135 59.3
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 5.3e-42 174.9 163 57.1
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 2.6e-41 172.6 141 57.4
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.0e-40 170.6 163 54.6
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 5.0e-40 168.3 125 60.0
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 1.2e-38 163.7 152 53.3
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 2.7e-38 162.5 159 53.5
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.5e-36 156.8 93 81.7
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 3.7e-35 152.1 128 59.4
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 4.8e-35 151.8 145 48.3
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.3e-35 151.4 92 82.6
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 1.8e-34 149.8 149 52.3
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 3.1e-34 149.1 130 58.5
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 6.9e-34 147.9 150 52.7
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 5.0e-32 141.7 96 66.7
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.4e-31 140.2 111 60.4
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.1e-28 130.6 90 74.4
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 2.6e-28 129.4 91 71.4
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 6.3e-27 124.8 89 68.5
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 1.5e-25 120.2 89 70.8
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 4.5e-25 118.6 93 61.3
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 6.5e-24 114.8 153 43.1
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 8.5e-24 114.4 84 54.8
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.7e-22 109.4 68 76.5
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.0e-21 107.5 74 71.6
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.8e-21 106.7 87 59.8
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 2.6e-20 102.8 136 39.7
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 4.4e-20 102.1 151 33.8
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 4.4e-20 102.1 70 61.4
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 5.9e-17 91.7 72 55.6
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 4.7e-14 82.0 111 43.2
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 2.3e-13 79.7 43 88.4
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 9.7e-12 74.3 42 83.3
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.7e-11 72.4 71 47.9
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 3.1e-10 69.3 60 63.3
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 6.5e-08 61.6 166 28.9


User provided reference genes

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