Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.1e-67 258.8 124 100.0
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 3.8e-45 184.9 122 78.7
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 1.8e-42 176.0 122 73.8
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 9.7e-41 170.2 122 68.9
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 9.7e-41 170.2 122 69.7
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 9.7e-41 170.2 122 69.7
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 9.7e-41 170.2 122 70.5
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.3e-40 169.9 122 69.7
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 2.2e-40 169.1 121 70.2
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 2.2e-40 169.1 122 70.5
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 4.8e-40 167.9 122 70.5
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.4e-39 166.4 122 67.2
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 2.4e-39 165.6 122 67.2
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.1e-39 165.2 122 68.0
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 6.9e-39 164.1 121 66.9
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 6.9e-39 164.1 122 65.6
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 6.9e-39 164.1 120 70.0
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 9.1e-39 163.7 122 65.6
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.2e-38 163.3 122 66.4
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 2.0e-38 162.5 122 68.0
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 2.6e-38 162.2 122 68.0
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 5.9e-38 161.0 122 67.2
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 7.7e-38 160.6 122 66.4
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 7.7e-38 160.6 122 63.9
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.0e-37 160.2 122 66.4
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.3e-37 159.8 122 66.4
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.3e-37 159.8 122 66.4
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.7e-37 159.5 122 62.3
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.7e-37 159.5 122 65.6
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.2e-37 159.1 122 65.6
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.9e-37 158.7 122 63.9
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.9e-37 158.7 122 64.8
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 2.9e-37 158.7 122 67.2
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 6.5e-37 157.5 122 65.6
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 6.5e-37 157.5 122 63.9
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.4e-36 156.4 143 58.7
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.9e-36 156.0 122 63.9
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.9e-36 156.0 122 64.8
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 2.5e-36 155.6 122 63.9
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 2.5e-36 155.6 122 62.3
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 4.2e-36 154.8 122 64.8
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 4.2e-36 154.8 122 63.1
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 4.2e-36 154.8 122 64.8
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 5.5e-36 154.5 122 63.1
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 7.2e-36 154.1 122 63.1
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 7.2e-36 154.1 122 63.9
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 7.2e-36 154.1 122 63.9
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 9.4e-36 153.7 122 63.1
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 9.4e-36 153.7 122 63.1
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 9.4e-36 153.7 122 63.1
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 9.4e-36 153.7 122 65.6
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 9.4e-36 153.7 122 61.5
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 9.4e-36 153.7 122 63.9
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.2e-35 153.3 122 60.7
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.6e-35 152.9 111 70.3
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.6e-35 152.9 123 63.4
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 2.1e-35 152.5 120 63.3
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 2.1e-35 152.5 122 62.3
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 2.1e-35 152.5 122 62.3
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 2.1e-35 152.5 122 62.3
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 2.1e-35 152.5 122 61.5
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 2.1e-35 152.5 122 61.5
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 2.1e-35 152.5 124 59.7
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 2.7e-35 152.1 122 61.5
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 2.7e-35 152.1 122 61.5
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 3.6e-35 151.8 122 63.9
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 3.6e-35 151.8 122 60.7
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.7e-35 151.4 121 62.0
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 6.1e-35 151.0 122 62.3
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 6.1e-35 151.0 122 59.8
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 6.1e-35 151.0 122 61.5
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 7.9e-35 150.6 122 62.3
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.3e-34 149.1 122 60.7
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 3.9e-34 148.3 122 60.7
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 5.1e-34 147.9 122 62.3
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 6.7e-34 147.5 122 59.8
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 6.7e-34 147.5 122 59.8
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 8.8e-34 147.1 119 63.9
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 1.1e-33 146.7 129 58.9
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.1e-33 146.7 122 58.2
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.1e-33 146.7 122 58.2
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.3e-33 145.2 122 59.0
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 4.4e-33 144.8 134 55.2
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 5.7e-33 144.4 122 59.8
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 7.4e-33 144.1 121 61.2
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 9.7e-33 143.7 124 56.5
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.7e-32 142.9 129 58.1
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.7e-32 142.9 114 62.3
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 2.2e-32 142.5 122 55.7
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 2.8e-32 142.1 120 60.8
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 2.8e-32 142.1 111 63.1
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 2.8e-32 142.1 122 59.0
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 8.2e-32 140.6 115 60.0
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.8e-31 139.4 150 52.0
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.4e-31 139.0 144 52.1
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 2.4e-31 139.0 113 61.1
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.4e-31 139.0 122 55.7
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 9.1e-31 137.1 122 56.6
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.2e-30 136.7 108 62.0
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 1.2e-30 136.7 127 56.7
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 2.0e-30 136.0 113 57.5
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 7.7e-30 134.0 122 54.9
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 5.5e-28 127.9 171 42.1
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 9.4e-28 127.1 115 53.0
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.6e-27 126.3 138 52.9
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 1.6e-27 126.3 110 54.5
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 8.0e-27 124.0 115 51.3
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 3.3e-25 118.6 108 57.4
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 7.5e-25 117.5 91 65.9
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 9.7e-25 117.1 122 52.5
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 1.4e-23 113.2 90 57.8
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 2.4e-23 112.5 122 50.0
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.1e-20 103.6 109 51.4
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 9.4e-20 100.5 108 50.0
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 9.4e-20 100.5 93 54.8
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 1.7e-16 89.7 78 62.8
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 1.1e-15 87.0 73 65.8
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.4e-15 86.7 78 57.7
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 7.0e-15 84.3 78 57.7
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 9.1e-15 84.0 79 57.0
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 9.1e-15 84.0 78 56.4
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.2e-14 83.6 113 39.8
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 2.0e-14 82.8 115 41.7
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 5.5e-12 74.7 111 37.8
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 5.5e-12 74.7 70 54.3
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 1.2e-11 73.6 47 72.3
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 2.1e-11 72.8 56 64.3
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 4.7e-11 71.6 47 70.2
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 8.0e-11 70.9 59 55.9
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 1.4e-07 60.1 43 62.8
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 7.0e-07 57.8 111 31.5
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 7.0e-07 57.8 73 46.6
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 1.2e-06 57.0 37 73.0


User provided reference genes

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