Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.4e-190 669.5 347 100.0
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 1.4e-158 563.1 347 82.4
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 5.3e-145 518.1 347 76.1
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 6.9e-137 491.1 349 73.1
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 9.1e-137 490.7 352 72.7
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.0e-136 489.6 347 72.9
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.9e-136 488.0 347 72.3
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 1.3e-135 486.9 347 72.0
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.7e-135 486.5 347 72.0
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 5.7e-131 471.5 347 71.5
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 2.6e-128 462.6 352 69.0
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 7.7e-128 461.1 351 67.0
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 5.2e-124 448.4 356 66.6
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 2.5e-118 429.5 353 65.7
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 9.4e-118 427.6 352 65.3
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 2.1e-117 426.4 354 65.0
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.7e-117 426.0 354 65.3
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 1.4e-116 423.7 335 65.7
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 6.3e-114 414.8 354 64.1
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 9.1e-113 411.0 351 63.8
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 1.6e-112 410.2 364 60.4
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 1.9e-110 403.3 362 62.2
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.9e-110 403.3 268 74.3
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 4.2e-110 402.1 358 60.9
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 8.0e-109 397.9 363 61.7
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 3.7e-106 389.0 360 59.4
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 4.8e-106 388.7 256 74.6
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.1e-105 387.5 356 61.2
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 1.2e-104 384.0 218 91.7
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.6e-104 383.6 352 58.2
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 2.7e-104 382.9 323 60.1
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 1.3e-103 380.6 360 58.1
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 3.8e-103 379.0 334 61.4
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.9e-102 376.7 319 60.2
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 7.2e-102 374.8 256 72.7
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 2.8e-101 372.9 274 69.7
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.4e-100 370.5 274 66.4
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 3.0e-100 369.4 274 68.6
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 3.0e-100 369.4 290 66.2
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 4.0e-100 369.0 272 68.0
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 5.2e-100 368.6 285 66.0
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 8.9e-100 367.9 354 59.3
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 7.5e-99 364.8 353 55.8
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 1.7e-98 363.6 272 67.6
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 2.2e-98 363.2 348 56.6
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 2.8e-98 362.8 344 57.8
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 3.7e-98 362.5 272 67.6
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 3.7e-98 362.5 353 55.0
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 4.9e-98 362.1 269 66.5
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 8.3e-98 361.3 269 67.3
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 1.1e-97 360.9 272 66.9
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 1.1e-97 360.9 347 55.0
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.8e-97 360.1 285 64.6
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.4e-97 359.8 340 57.1
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 7.0e-97 358.2 361 55.1
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 3.5e-96 355.9 358 54.5
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 7.8e-96 354.8 354 58.8
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.3e-95 354.0 361 54.8
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.3e-95 353.2 348 55.7
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 3.9e-95 352.4 356 54.2
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 5.0e-95 352.1 271 64.9
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 6.6e-95 351.7 356 53.9
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 6.1e-93 345.1 268 63.8
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 6.1e-93 345.1 311 59.5
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 8.0e-93 344.7 268 63.4
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 2.3e-92 343.2 275 64.4
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 4.0e-92 342.4 255 65.5
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 4.0e-92 342.4 352 56.0
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 5.2e-92 342.0 344 54.9
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 2.0e-91 340.1 349 52.7
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 2.6e-91 339.7 324 54.6
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 4.4e-91 339.0 274 60.6
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 4.9e-90 335.5 369 52.3
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 3.2e-89 332.8 350 51.1
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 4.1e-89 332.4 328 55.2
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 7.0e-89 331.6 340 52.9
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 9.2e-89 331.3 291 58.1
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 1.2e-88 330.9 339 52.8
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.2e-88 330.9 341 52.2
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.6e-88 328.9 328 54.3
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 6.0e-88 328.6 314 55.4
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 1.3e-87 327.4 272 63.6
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 1.7e-87 327.0 354 49.7
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 3.0e-87 326.2 343 53.1
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 8.6e-87 324.7 403 47.1
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 2.5e-86 323.2 343 52.8
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 7.3e-86 321.6 298 57.0
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 7.3e-86 321.6 262 61.1
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 2.1e-85 320.1 282 60.3
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 2.1e-85 320.1 330 52.7
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 3.6e-85 319.3 345 52.2
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 8.0e-85 318.2 266 60.2
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 8.0e-85 318.2 319 54.2
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 3.1e-84 316.2 273 58.6
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 4.0e-84 315.8 327 52.3
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 7.5e-83 311.6 346 52.0
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.9e-81 307.0 296 53.0
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 7.3e-78 295.0 272 52.9
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 1.6e-77 293.9 355 48.5
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 6.2e-77 292.0 282 57.1
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 4.0e-76 289.3 231 63.2
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 1.5e-75 287.3 293 56.0
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 3.4e-75 286.2 231 64.1
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 5.4e-73 278.9 216 63.4
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 7.1e-57 225.3 236 51.7
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 1.3e-45 188.0 162 58.0
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 7.4e-38 162.2 136 58.1
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 5.7e-30 136.0 74 91.9
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.9e-26 123.6 291 30.9
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 1.2e-19 101.7 296 27.7
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 3.0e-15 87.0 190 32.6
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 7.2e-09 65.9 78 44.9
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 2.7e-08 63.9 81 48.1
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 4.0e-07 60.1 307 21.2
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 2.6e-06 57.4 79 46.8
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 2.6e-06 57.4 263 24.7
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 7.5e-06 55.8 31 74.2


User provided reference genes

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