Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 6.0e-59 230.7 123 100.0
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 6.4e-53 210.7 123 90.2
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 1.9e-49 199.1 120 90.0
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 5.8e-46 187.6 114 84.2
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.1e-43 179.1 119 78.2
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 2.7e-43 178.7 114 80.7
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 2.7e-43 178.7 114 80.7
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 7.9e-43 177.2 119 77.3
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 7.9e-43 177.2 119 77.3
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.0e-42 176.8 113 79.6
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.3e-42 176.4 121 79.3
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 8.7e-42 173.7 119 73.9
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 8.7e-42 173.7 120 74.2
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 1.1e-41 173.3 120 71.7
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.5e-41 172.9 119 75.6
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 2.5e-41 172.2 121 70.2
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.3e-41 171.4 120 73.3
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 4.3e-41 171.4 120 73.3
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 7.4e-41 170.6 118 71.2
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.3e-40 169.9 121 72.7
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 2.1e-40 169.1 118 72.9
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 2.8e-40 168.7 114 72.8
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 2.8e-40 168.7 118 70.3
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 2.8e-40 168.7 115 72.2
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 3.7e-40 168.3 120 73.3
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 6.2e-40 167.5 118 70.3
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 8.1e-40 167.2 118 69.5
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 8.1e-40 167.2 123 72.4
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 1.4e-39 166.4 114 74.6
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 2.4e-39 165.6 116 70.7
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 4.0e-39 164.9 113 72.6
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 5.3e-39 164.5 118 70.3
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 5.3e-39 164.5 120 70.8
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 6.9e-39 164.1 121 71.9
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 9.0e-39 163.7 112 73.2
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 9.0e-39 163.7 114 72.8
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.5e-38 162.9 103 76.7
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.0e-38 162.5 120 70.0
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 2.0e-38 162.5 113 71.7
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 3.4e-38 161.8 120 66.7
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 3.4e-38 161.8 112 71.4
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 3.4e-38 161.8 115 70.4
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 5.8e-38 161.0 113 69.9
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 5.8e-38 161.0 115 69.6
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 7.6e-38 160.6 113 70.8
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 7.6e-38 160.6 116 69.0
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 9.9e-38 160.2 116 69.8
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 9.9e-38 160.2 116 69.8
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.7e-37 159.5 115 70.4
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 1.7e-37 159.5 111 70.3
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.2e-37 159.1 118 66.9
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.2e-37 159.1 120 68.3
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.2e-37 159.1 120 68.3
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 2.2e-37 159.1 120 66.7
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 6.4e-37 157.5 111 70.3
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 8.4e-37 157.1 112 73.2
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 8.4e-37 157.1 120 69.2
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.4e-36 156.4 111 72.1
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.9e-36 156.0 112 71.4
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 5.5e-36 154.5 115 68.7
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 5.5e-36 154.5 120 64.2
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.1e-36 154.1 103 75.7
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 1.2e-35 153.3 120 64.2
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 1.6e-35 152.9 118 65.3
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 3.5e-35 151.8 118 66.1
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.0e-34 150.2 119 65.5
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 2.3e-34 149.1 117 65.8
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 6.7e-34 147.5 108 67.6
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 8.7e-34 147.1 120 63.3
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 1.1e-33 146.7 120 61.7
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 3.7e-32 141.7 122 61.5
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 6.2e-32 141.0 115 64.3
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 1.1e-31 140.2 118 61.0
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 1.8e-31 139.4 96 76.0
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 2.4e-31 139.0 103 68.0
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 2.4e-31 139.0 103 67.0
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 3.1e-31 138.7 108 64.8
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 9.0e-31 137.1 120 61.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 1.2e-30 136.7 115 60.9
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 5.8e-30 134.4 109 65.1
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 2.2e-29 132.5 94 68.1
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 2.2e-29 132.5 119 57.1
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 6.5e-29 131.0 115 58.3
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 2.5e-28 129.0 114 59.6
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.1e-28 127.5 119 58.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 2.1e-27 125.9 77 83.1
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 3.5e-27 125.2 76 81.6
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 3.5e-27 125.2 115 59.1
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 1.0e-26 123.6 121 56.2
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 1.0e-26 123.6 118 57.6
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.3e-26 122.5 119 56.3
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 3.0e-26 122.1 115 54.8
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 5.1e-26 121.3 112 56.2
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 5.1e-26 121.3 77 77.9
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 5.1e-26 121.3 115 56.5
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 2.5e-25 119.0 120 56.7
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.3e-24 116.7 120 55.0
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 2.8e-24 115.5 122 55.7
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.7e-24 115.2 76 73.7
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 3.7e-24 115.2 76 73.7
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 6.3e-24 114.4 91 62.6
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 2.4e-23 112.5 96 60.4
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.4e-23 112.5 119 52.9
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 6.9e-23 110.9 122 50.8
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 9.0e-23 110.5 116 51.7
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 5.9e-22 107.8 59 86.4
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.9e-22 107.8 59 86.4
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 1.3e-21 106.7 111 53.2
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 9.3e-20 100.5 74 67.6
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 9.3e-20 100.5 112 48.2
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 9.3e-20 100.5 102 48.0
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.2e-19 100.1 76 65.8
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.1e-19 99.4 74 66.2
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 2.1e-19 99.4 96 56.2
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 3.6e-19 98.6 107 50.5
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 4.6e-19 98.2 107 52.3
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 4.6e-19 98.2 107 52.3
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 7.9e-19 97.4 70 70.0
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 7.9e-19 97.4 70 70.0
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.0e-18 97.1 111 47.7
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.8e-18 96.3 72 66.7
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 7.4e-17 90.9 86 62.8
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 3.1e-15 85.5 103 42.7
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 5.9e-14 81.3 79 46.8
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.9e-13 79.0 94 39.4
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.1e-12 77.0 101 41.6
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 2.1e-11 72.8 46 76.1
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 1.8e-10 69.7 44 75.0
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.3e-10 69.3 56 60.7
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.1e-07 60.5 103 38.8


User provided reference genes

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