Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 3.2e-54 214.9 115 100.0
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 2.5e-43 178.7 113 87.6
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 2.1e-21 105.9 63 82.5
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 1.6e-18 96.3 117 58.1
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.6e-18 96.3 117 58.1
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.6e-18 96.3 117 58.1
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.2e-18 95.9 117 58.1
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 3.7e-18 95.1 119 58.0
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.4e-17 92.4 117 56.4
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 6.9e-17 90.9 100 62.0
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 8.5e-15 84.0 115 52.2
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 3.2e-14 82.0 103 56.3
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 4.2e-14 81.6 84 61.9
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 7.2e-14 80.9 97 55.7
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 7.2e-14 80.9 96 57.3
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 4.6e-13 78.2 124 49.2
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.1e-13 77.8 109 48.6
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.1e-13 77.8 109 48.6
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.3e-12 75.9 108 47.2
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 3.9e-12 75.1 96 54.2
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 5.1e-12 74.7 83 54.2
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 8.8e-12 73.9 75 56.0
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.1e-11 73.6 101 54.5
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.0e-11 72.8 110 46.4
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 3.3e-11 72.0 77 51.9
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 4.3e-11 71.6 88 51.1
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 5.7e-11 71.2 96 49.0
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 7.4e-11 70.9 111 45.0
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 1.3e-10 70.1 97 47.4
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 2.2e-10 69.3 106 45.3
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.8e-10 68.9 112 42.0
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.8e-10 68.9 61 60.7
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 4.8e-10 68.2 60 60.0
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 4.8e-10 68.2 118 45.8
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 8.2e-10 67.4 95 47.4
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 1.1e-09 67.0 77 49.4
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.4e-09 66.6 58 60.3
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.4e-09 66.6 90 46.7
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.8e-09 66.2 86 47.7
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.4e-09 65.9 99 46.5
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 3.1e-09 65.5 102 39.2
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 3.1e-09 65.5 88 50.0
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 3.1e-09 65.5 63 54.0
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 3.1e-09 65.5 98 46.9
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 4.1e-09 65.1 94 40.4
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 5.3e-09 64.7 96 46.9
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 5.3e-09 64.7 103 46.6
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 6.9e-09 64.3 59 55.9
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 6.9e-09 64.3 93 43.0
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 6.9e-09 64.3 101 41.6
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 9.1e-09 63.9 112 40.2
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 1.2e-08 63.5 60 53.3
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.5e-08 63.2 91 46.2
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 1.5e-08 63.2 97 46.4
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 1.5e-08 63.2 54 57.4
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 2.6e-08 62.4 106 46.2
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 2.6e-08 62.4 96 45.8
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 3.4e-08 62.0 93 45.2
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 3.4e-08 62.0 96 39.6
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 3.4e-08 62.0 65 49.2
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 1.0e-07 60.5 104 41.3
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 2.9e-07 58.9 104 39.4
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 2.9e-07 58.9 104 39.4
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 2.9e-07 58.9 104 39.4
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.9e-07 58.9 105 42.9
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 8.5e-07 57.4 80 43.8
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.4e-06 56.6 103 43.7
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 1.4e-06 56.6 115 40.9
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 2.5e-06 55.8 41 61.0
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 2.5e-06 55.8 105 42.9
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 3.2e-06 55.5 98 41.8
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 5.5e-06 54.7 99 40.4
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 7.2e-06 54.3 77 44.2
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 7.2e-06 54.3 111 36.0
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 9.4e-06 53.9 60 51.7
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 9.4e-06 53.9 110 38.2


User provided reference genes

Program Settings